RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SOX5P35711 763 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 NNMTP40261 264 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 MATKP42679 507 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 GABRB2P47870 512 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 RPL6Q02878 288 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 SLC12A1Q13621 1099 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 ZNF234Q14588 700 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 RSPO4Q2I0M5 234 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 PTPN20Q4JDL3 420 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 FAM133BQ5BKY9 247 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 ZC3H12AQ5D1E8 599 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 BRMS1LQ5PSV4 323 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 SYCP2LQ5T4T6 812 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 FAM102AQ5T9C2 384 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 SYPL2Q5VXT5 272 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 LYSMD4Q5XG99 296 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 MBLAC2Q68D91 279 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 IL31Q6EBC2 164 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 CAVIN1Q6NZI2 390 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 RFWD3Q6PCD5 774 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 LGI2Q8N0V4 545 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 CARNMT1Q8N4J0 409 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 FIBINQ8TAL6 211 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 EPS8L1Q8TE68 723 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 GANQ9H2C0 597 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 NLRC4Q9NPP4 1024 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.58□□□□□ -0.72
CCM2-208ENST00000476594 COX16Q9P0S2 106 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
CCM2-208ENST00000476594 KIAA1522Q9P206 1035 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 AJAP1Q9UKB5 411 aaPredicted RBP10.58□□□□□ -0.72
CCM2-208ENST00000476594 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 A0A1B0GVM2 712 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 A0A1W2PQF6 199 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 BCLAF3A2AJT9 711 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 TCAF2A6NFQ2 919 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 M0QYT0 321 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 KHNYNO15037 678 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 DCLK1O15075 740 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RNASEH1O60930 286 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 GRAP2O75791 330 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 GFPT2O94808 682 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 LUC7L3O95232 432 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 IGLV3-25P01717 112 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 ERBB2P04626 1255 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 CHRM1P11229 460 aaPredicted RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 SLC6A4P31645 630 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 IL12RB1P42701 662 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 NSFP46459 744 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 SULT1E1P49888 294 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 LIMK1P53667 647 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 CDR2Q01850 454 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 SULT2A1Q06520 285 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 NME3Q13232 169 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 ENPP2Q13822 863 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 TTC31Q49AM3 519 aaPredicted RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 ANO6Q4KMQ2 910 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RAP1GAP2Q684P5 730 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RNF43Q68DV7 783 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 LRRC31Q6UY01 552 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 KDM1BQ8NB78 822 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 CEP76Q8TAP6 659 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RMDN1Q96DB5 314 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 SIPA1Q96FS4 1042 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RPRD1AQ96P16 312 aaPredicted RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 ERGIC2Q96RQ1 377 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 ACOX2Q99424 681 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 NUSAP1Q9BXS6 441 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 WDCPQ9H6R7 721 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 PARD6AQ9NPB6 346 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 DLL3Q9NYJ7 618 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 SUSD2Q9UGT4 822 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 RAD54BQ9Y620 910 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.57□□□□□ -0.72
CCM2-208ENST00000476594 RALGAPA1Q6GYQ0 2036 aa10.57□□□□□ -0.72
CCM2-208ENST00000476594 CEP250Q9BV73 2442 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 GOLGA6L7A0A1B0GV03 622 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ANKRD62A6NC57 917 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 DNTTP04053 509 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 SRPRAP08240 638 aaKnown RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 GNSP15586 552 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 FERP16591 822 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ZNF18P17022 549 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 TGM1P22735 817 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 HOXC13P31276 330 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 ZNF165P49910 485 aa10.56□□□□□ -0.72
CCM2-208ENST00000476594 RNASE9P60153 205 aaKnown RBP10.56□□□□□ -0.72
CCM2-208ENST00000476594 NOMO3P69849 1222 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms