RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SLC6A4P31645 630 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 CLCN1P35523 988 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 IL12RB1P42701 662 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 DHPSP49366 369 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 KRT31Q15323 416 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 DCAF6Q58WW2 860 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 PIK3R6Q5UE93 754 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 KLHDC7AQ5VTJ3 777 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 SYPL2Q5VXT5 272 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC36A4Q6YBV0 504 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 LPCAT2Q7L5N7 544 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 CYP2U1Q7Z449 544 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 CCDC117Q8IWD4 279 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 WDTC1Q8N5D0 677 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 TMEM35BQ8NCS4 154 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 MSANTD4Q8NCY6 345 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 RLN3Q8WXF3 142 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC39A13Q96H72 371 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 VPS16Q9H269 839 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 PLCB1Q9NQ66 1216 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 GGA2Q9UJY4 613 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 CLEC4EQ9ULY5 219 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
NUDCD3-206ENST00000475952 PLXNA2O75051 1894 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 BCLAF3A2AJT9 711 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SRRM3A6NNA2 597 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 F8VZ95 297 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 AP5Z1O43299 807 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SYNCRIPO60506 623 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 TBL1XO60907 577 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 DAB1O75553 588 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 CAVIN2O95810 425 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 IGLV3-25P01717 112 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC2A3P11169 496 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 PABPC1P11940 636 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 NDUFV2P19404 249 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 DPP6P42658 865 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 NOVA1P51513 510 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SGSHP51688 502 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 CDK17Q00537 523 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 ZNF252P-AS1Q0IIN9 211 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 FOXC1Q12948 553 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 MTA1Q13330 715 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 CDH18Q13634 790 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 ENPP2Q13822 863 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 ZNF234Q14588 700 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 MAP7D1Q3KQU3 841 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 PTPN20Q4JDL3 420 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SPDYCQ5MJ68 293 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 RNF43Q68DV7 783 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 NADSYN1Q6IA69 706 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 TCEAL6Q6IPX3 200 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 KIAA1211LQ6NV74 962 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 RFWD3Q6PCD5 774 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SERPINA13PQ6UXR4 307 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 CHST9Q7L1S5 443 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 DEFB106AQ8N104 65 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 GATA6Q92908 595 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 TCEAL3Q969E4 200 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 BTN2A3PQ96KV6 586 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC2A13Q96QE2 648 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 NAA15Q9BXJ9 866 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 CD248Q9HCU0 757 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 ABCB8Q9NUT2 735 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 FANCLQ9NW38 375 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC12A6Q9UHW9 1150 aa11.81□□□□□ -0.52
NUDCD3-206ENST00000475952 PCNX2A6NKB5 2137 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 WASH3PC4AMC7 463 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 F5H5T6 163 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 GRAP2O75791 330 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 LSM8O95777 96 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 TOP3BO95985 862 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ERBB2P04626 1255 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ATP5BP06576 529 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 EPHX1P07099 455 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 POLR2EP19388 210 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 ABCB4P21439 1286 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 CCR1P32246 355 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 COPB1P53618 953 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
NUDCD3-206ENST00000475952 RPL6Q02878 288 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms