RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CFAP52Q8N1V2 620 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CHCHD4Q8N4Q1 142 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 KDF1Q8NAX2 398 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 FIBINQ8TAL6 211 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RNF139Q8WU17 664 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 UCMAQ8WVF2 138 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF606Q8WXB4 792 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 PRCCQ92733 491 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 AZIN2Q96A70 460 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 TTC17Q96AE7 1141 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 RNF25Q96BH1 459 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 MRGPRX3Q96LB0 322 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 ORAI3Q9BRQ5 295 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 INTS2Q9H0H0 1204 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 NUCKS1Q9H1E3 243 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 C6orf106Q9H6K1 298 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 UBE2TQ9NPD8 197 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 EIF2B4Q9UI10 523 aaKnown RBP7.3□□□□□ -1.24
HDAC3-207ENST00000475549 GGA2Q9UJY4 613 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 KLK13Q9UKR3 277 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 PLA2G4CQ9UP65 541 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CTNND2Q9UQB3 1225 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
HDAC3-207ENST00000475549 CACNA1EQ15878 2313 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 A0A1B0GTW7 788 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 FAM221BA6H8Z2 402 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 C10orf142B7Z368 130 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 E5RJQ4 531 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 TAF4O00268 1085 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 KCNK3O14649 394 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 FBXO21O94952 628 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 LETM1O95202 739 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 IGLV3-25P01717 112 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 AFPP02771 609 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SYPP08247 313 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 GNSP15586 552 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SLC9A1P19634 815 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 OXTRP30559 389 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 CSNK1EP49674 416 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ATXN3P54252 364 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF445P59923 1031 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 PAK1Q13153 545 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SLC14A1Q13336 389 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 STIM1Q13586 685 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 BECN1Q14457 450 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 TRIP6Q15654 476 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 CAMK4Q16566 473 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 HLA-BQ31612 363 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 DCAF6Q58WW2 860 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ZC3H12AQ5D1E8 599 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 MS4A13Q5J8X5 152 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 WDR45BQ5MNZ6 344 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SYCP2LQ5T4T6 812 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 TRIM65Q6PJ69 517 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 RABEPKQ7Z6M1 372 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 UNC45BQ8IWX7 931 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 AHI1Q8N157 1196 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 HDDC3Q8N4P3 179 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ZCCHC9Q8N567 271 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 PNPLA1Q8N8W4 532 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 PRMT1Q99873 361 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 CRACR2AQ9BSW2 395 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ADAM33Q9BZ11 813 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 MIR1-1HGQ9H1L0 117 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SLC32A1Q9H598 525 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 EBF2Q9HAK2 575 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ST7Q9NRC1 585 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 STIM2Q9P246 746 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SERGEFQ9UGK8 458 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SLCO3A1Q9UIG8 710 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 HOOK1Q9UJC3 728 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ZMIZ1Q9ULJ6 1067 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 TLR6Q9Y2C9 796 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 FNDC3AQ9Y2H6 1198 aaKnown RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC3-207ENST00000475549 IGF2RP11717 2491 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 SPAG17Q6Q759 2223 aa7.29□□□□□ -1.24
HDAC3-207ENST00000475549 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 A0A1B0GVT2 93 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 BICDL2A1A5D9 508 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 MEI4A8MW99 385 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 TTC34A8MYJ7 566 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 KCNU1A8MYU2 1149 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 WNT9AO14904 365 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 BCAT2O15382 392 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-207ENST00000475549 IRAK2O43187 625 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 GNA14O95837 355 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 IGHV4-34P06331 123 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 ACADMP11310 421 aa7.28□□□□□ -1.24
HDAC3-207ENST00000475549 KRT5P13647 590 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms