RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TBL1XO60907 577 aa21.3■■□□□ 1
VPS36-203ENST00000475375 RNASEH1O60930 286 aaKnown RBP21.3■■□□□ 1
VPS36-203ENST00000475375 LDOC1O95751 146 aaPredicted RBP21.3■■□□□ 1
VPS36-203ENST00000475375 PRB1P04280 392 aa21.3■■□□□ 1
VPS36-203ENST00000475375 IGHV4-34P06331 123 aa21.3■■□□□ 1
VPS36-203ENST00000475375 ITGAVP06756 1048 aa21.3■■□□□ 1
VPS36-203ENST00000475375 RPL13P26373 211 aaKnown RBP21.3■■□□□ 1
VPS36-203ENST00000475375 ST8SIA6P61647 398 aa21.3■■□□□ 1
VPS36-203ENST00000475375 SEMG2Q02383 582 aa21.3■■□□□ 1
VPS36-203ENST00000475375 C19orf57Q0VDD7 668 aa21.3■■□□□ 1
VPS36-203ENST00000475375 BSPRYQ5W0U4 402 aa21.3■■□□□ 1
VPS36-203ENST00000475375 LRRC69Q6ZNQ3 347 aa21.3■■□□□ 1
VPS36-203ENST00000475375 SIX6OS1Q8N1H7 587 aa21.3■■□□□ 1
VPS36-203ENST00000475375 ADAM32Q8TC27 787 aa21.3■■□□□ 1
VPS36-203ENST00000475375 CNDP2Q96KP4 475 aaKnown RBP21.3■■□□□ 1
VPS36-203ENST00000475375 ELF4Q99607 663 aaPredicted RBP21.3■■□□□ 1
VPS36-203ENST00000475375 PABPC3Q9H361 631 aaKnown RBP21.3■■□□□ 1
VPS36-203ENST00000475375 FBXL12Q9NXK8 326 aa21.3■■□□□ 1
VPS36-203ENST00000475375 AK5Q9Y6K8 562 aa21.3■■□□□ 1
VPS36-203ENST00000475375 CBX4O00257 560 aa21.29■■□□□ 1
VPS36-203ENST00000475375 XPO1O14980 1071 aaKnown RBP21.29■■□□□ 1
VPS36-203ENST00000475375 LATS1O95835 1130 aa21.29■■□□□ 1
VPS36-203ENST00000475375 ZSCAN22P10073 491 aaPredicted RBP21.29■■□□□ 1
VPS36-203ENST00000475375 ITPKBP27987 946 aa21.29■■□□□ 1
VPS36-203ENST00000475375 GTF2H1P32780 548 aa21.29■■□□□ 1
VPS36-203ENST00000475375 CD70P32970 193 aa21.29■■□□□ 1
VPS36-203ENST00000475375 SGSHP51688 502 aa21.29■■□□□ 1
VPS36-203ENST00000475375 ADAM9Q13443 819 aa21.29■■□□□ 1
VPS36-203ENST00000475375 RFWD3Q6PCD5 774 aa21.29■■□□□ 1
VPS36-203ENST00000475375 BHLHA9Q7RTU4 235 aa21.29■■□□□ 1
VPS36-203ENST00000475375 KIAA0907Q7Z7F0 614 aaPredicted RBP21.29■■□□□ 1
VPS36-203ENST00000475375 FBXL13Q8NEE6 735 aa21.29■■□□□ 1
VPS36-203ENST00000475375 WFDC5Q8TCV5 224 aa21.29■■□□□ 1
VPS36-203ENST00000475375 TATDN2Q93075 761 aa21.29■■□□□ 1
VPS36-203ENST00000475375 ORAI3Q9BRQ5 295 aa21.29■■□□□ 1
VPS36-203ENST00000475375 RSPH9Q9H1X1 276 aaPredicted RBP21.29■■□□□ 1
VPS36-203ENST00000475375 STIM2Q9P246 746 aa21.29■■□□□ 1
VPS36-203ENST00000475375 STOML2Q9UJZ1 356 aa21.29■■□□□ 1
VPS36-203ENST00000475375 CFAP45Q9UL16 551 aa21.29■■□□□ 1
VPS36-203ENST00000475375 PCDHGA1Q9Y5H4 931 aa21.29■■□□□ 1
VPS36-203ENST00000475375 FLNBO75369 2602 aaKnown RBP21.28■■□□□ 1
VPS36-203ENST00000475375 MUC22E2RYF6 1773 aaPredicted RBP21.28■■□□□ 1
VPS36-203ENST00000475375 KNTC1P50748 2209 aa21.28■■□□□ 1
VPS36-203ENST00000475375 A0A1W2PPC4 97 aa21.28■■□□□ 1
VPS36-203ENST00000475375 YJEFN3A6XGL0 299 aa21.28■■□□□ 1
VPS36-203ENST00000475375 E7ENQ6 273 aa21.28■■□□□ 1
VPS36-203ENST00000475375 PAPSS1O43252 624 aaPredicted RBP21.28■■□□□ 1
VPS36-203ENST00000475375 RFPL3O75679 317 aa21.28■■□□□ 1
VPS36-203ENST00000475375 F13A1P00488 732 aa21.28■■□□□ 1
VPS36-203ENST00000475375 C7P10643 843 aa21.28■■□□□ 1
VPS36-203ENST00000475375 CD19P15391 556 aa21.28■■□□□ 1
VPS36-203ENST00000475375 MXI1P50539 228 aa21.28■■□□□ 1
VPS36-203ENST00000475375 BST2Q10589 180 aaKnown RBP21.28■■□□□ 1
VPS36-203ENST00000475375 SFSWAPQ12872 951 aaKnown RBP21.28■■□□□ 1
VPS36-203ENST00000475375 DNAJC3Q13217 504 aa21.28■■□□□ 1
VPS36-203ENST00000475375 NFIL3Q16649 462 aa21.28■■□□□ 1
VPS36-203ENST00000475375 SGO2Q562F6 1265 aa21.28■■□□□ 1
VPS36-203ENST00000475375 NCEH1Q6PIU2 408 aa21.28■■□□□ 1
VPS36-203ENST00000475375 USP30Q70CQ3 517 aa21.28■■□□□ 1
VPS36-203ENST00000475375 ABCC13Q9NSE7 274 aa21.28■■□□□ 1
VPS36-203ENST00000475375 RAB20Q9NX57 234 aa21.28■■□□□ 1
VPS36-203ENST00000475375 TSPAN16Q9UKR8 245 aa21.28■■□□□ 1
VPS36-203ENST00000475375 SCML1Q9UN30 329 aa21.28■■□□□ 1
VPS36-203ENST00000475375 KALRNO60229 2985 aa21.28■■□□□ 1
VPS36-203ENST00000475375 GOLGA6L7A0A1B0GV03 622 aa21.27■■□□□ 1
VPS36-203ENST00000475375 A0A1B0GVL5 298 aa21.27■■□□□ 1
VPS36-203ENST00000475375 A0A1W2PP55 124 aa21.27■■□□□ 1
VPS36-203ENST00000475375 LRRC72A6NJI9 287 aa21.27■■□□□ 1
VPS36-203ENST00000475375 RNASEH2AO75792 299 aaKnown RBP21.27■■□□□ 1
VPS36-203ENST00000475375 MYL1P05976 194 aa21.27■■□□□ 1
VPS36-203ENST00000475375 PFKFB1P16118 471 aa21.27■■□□□ 1
VPS36-203ENST00000475375 SLC11A2P49281 568 aa21.27■■□□□ 1
VPS36-203ENST00000475375 GALCP54803 685 aa21.27■■□□□ 1
VPS36-203ENST00000475375 ENPEPQ07075 957 aa21.27■■□□□ 1
VPS36-203ENST00000475375 MFN1Q8IWA4 741 aa21.27■■□□□ 1
VPS36-203ENST00000475375 DHX40Q8IX18 779 aaKnown RBP21.27■■□□□ 1
VPS36-203ENST00000475375 UBA3Q8TBC4 463 aa21.27■■□□□ 1
VPS36-203ENST00000475375 SLC39A7Q92504 469 aa21.27■■□□□ 1
VPS36-203ENST00000475375 FAXDC2Q96IV6 333 aa21.27■■□□□ 1
VPS36-203ENST00000475375 OMDQ99983 421 aa21.27■■□□□ 1
VPS36-203ENST00000475375 SERGEFQ9UGK8 458 aa21.27■■□□□ 1
VPS36-203ENST00000475375 USP25Q9UHP3 1055 aa21.27■■□□□ 1
VPS36-203ENST00000475375 MID1O15344 667 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 RRP8O43159 456 aaKnown RBP21.26■□□□□ 0.99
VPS36-203ENST00000475375 SIN3BO75182 1162 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 CDK4P11802 303 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 LCP1P13796 627 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 MPP7Q5T2T1 576 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 PIK3R6Q5UE93 754 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 ATL3Q6DD88 541 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 EID2Q8N6I1 236 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 ZNF557Q8N988 423 aaPredicted RBP21.26■□□□□ 0.99
VPS36-203ENST00000475375 NEUROG2Q9H2A3 272 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 GDF3Q9NR23 364 aa21.26■□□□□ 0.99
VPS36-203ENST00000475375 TYW5A2RUC4 315 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 STX10O60499 249 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 WNT1P04628 370 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 C1SP09871 688 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 CD38P28907 300 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms