RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
SKA3-206ENST00000475251 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 OXR1Q8N573 874 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
SKA3-206ENST00000475251 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
SKA3-206ENST00000475251 RSPH9Q9H1X1 276 aaPredicted RBP13.13□□□□□ -0.31
SKA3-206ENST00000475251 PRORYQ9H606 182 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 LRRC4Q9HBW1 653 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 GDF3Q9NR23 364 aa13.13□□□□□ -0.31
SKA3-206ENST00000475251 GOLGA4Q13439 2230 aaKnown RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 TEX51A0A1B0GUA7 166 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 TYW5A2RUC4 315 aaKnown RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 FAM47DPA6NHR8 397 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 IRAK2O43187 625 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 MYL1P05976 194 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 IGHV4-34P06331 123 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 RPL13P26373 211 aaKnown RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 CD38P28907 300 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 ME1P48163 572 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 GCLMP48507 274 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 SEMG2Q02383 582 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 RTP5Q14D33 572 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 NFIL3Q16649 462 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 C1orf220Q5T0J3 134 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 PABPC3Q9H361 631 aaKnown RBP13.12□□□□□ -0.31
SKA3-206ENST00000475251 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 AASDHPPTQ9NRN7 309 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 FBXL12Q9NXK8 326 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
SKA3-206ENST00000475251 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 CABIN1Q9Y6J0 2220 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 KLRC4O43908 158 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 PRB1P04280 392 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 ASLP04424 464 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 NR2F2P24468 414 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 ITPKBP27987 946 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 GTF2H1P32780 548 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 SLC11A2P49281 568 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 TARDBPQ13148 414 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKA3-206ENST00000475251 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 RESP18Q5W5W9 173 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 KRT39Q6A163 491 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 UNC45BQ8IWX7 931 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 SIX6OS1Q8N1H7 587 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 OR2T34Q8NGX1 318 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
SKA3-206ENST00000475251 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
SKA3-206ENST00000475251 SLC6A18Q96N87 628 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 OMDQ99983 421 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 ULBP1Q9BZM6 244 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 CISHQ9NSE2 258 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 ABCC13Q9NSE7 274 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
SKA3-206ENST00000475251 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 STX10O60499 249 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 ACTN2P35609 894 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 PSMC2P35998 433 aaKnown RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 ACADVLP49748 655 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 CCR5P51681 352 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 GALCP54803 685 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 CST6Q15828 149 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 HES3Q5TGS1 186 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 GPR155Q7Z3F1 870 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 MFN1Q8IWA4 741 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 CACTIN-AS1Q8N1I8 211 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 SLC4A11Q8NBS3 891 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 FGF11Q92914 225 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 DDX50Q9BQ39 737 aaKnown RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms