RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
USP39-214ENST00000474572 USP15Q9Y4E8 981 aaPredicted RBP10.11□□□□□ -0.79
USP39-214ENST00000474572 GREB1Q4ZG55 1949 aa10.11□□□□□ -0.79
USP39-214ENST00000474572 SYNJ2BP-COX16A0A087WUM0 186 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ARVCFO00192 962 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MTSS1O43312 755 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 CREB3O43889 395 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 SUN1O94901 812 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 OAZ2O95190 189 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 GSTA1P08263 222 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 INHBAP08476 426 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 KRT4P19013 534 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 CA4P22748 312 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 PTPN3P26045 913 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 SERPINB6P35237 376 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 RPA3P35244 121 aaPredicted RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 ETV4P43268 484 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 SLC5A3P53794 718 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 NRG1Q02297 640 aaPredicted RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 YWHAHQ04917 246 aaPredicted RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 ACTN3Q08043 901 aaPredicted RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 NIPAL4Q0D2K0 466 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 FAAP100Q0VG06 881 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MTM1Q13496 603 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 NAB1Q13506 487 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MRPL58Q14197 206 aaKnown RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 FRG1Q14331 258 aaKnown RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 SPRED3Q2MJR0 410 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 DEFB115Q30KQ5 88 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 NUGGCQ68CJ6 796 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MSANTD2Q6P1R3 559 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ZNF449Q6P9G9 518 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 CCDC121Q6ZUS5 278 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 DENND5BQ6ZUT9 1274 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MARK2Q7KZI7 788 aaKnown RBP10.1□□□□□ -0.79
USP39-214ENST00000474572 CHSY1Q86X52 802 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ZNF567Q8N184 647 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MPP5Q8N3R9 675 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 NPWQ8N729 165 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 GDAP1Q8TB36 358 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ADAM32Q8TC27 787 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 PPM1EQ8WY54 764 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ARNTL2Q8WYA1 636 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 FUBP3Q96I24 572 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP39-214ENST00000474572 APOPT1Q96IL0 206 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 HAPLN3Q96S86 360 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 VAT1Q99536 393 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 EPAS1Q99814 870 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 GORASP1Q9BQQ3 440 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 PLCD4Q9BRC7 762 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 TRPV6Q9H1D0 765 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 SMOC2Q9H3U7 446 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 WDCPQ9H6R7 721 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 MLXIPLQ9NP71 852 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 ABCC13Q9NSE7 274 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 TMEM161AQ9NX61 479 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP39-214ENST00000474572 MOCS1Q9NZB8 636 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 COX16Q9P0S2 106 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 STARD13Q9Y3M8 1113 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 NR2E3Q9Y5X4 410 aa10.1□□□□□ -0.79
USP39-214ENST00000474572 NYNRINQ9P2P1 1898 aaKnown RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 F8W810 466 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SYN3O14994 580 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 CACNG3O60359 315 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 EDF1O60869 148 aaKnown RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 LRIG2O94898 1065 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 IL1BP01584 269 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 INHAP05111 366 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SNRPAP09012 282 aaKnown RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 CSH1P0DML2 217 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 CSH2P0DML3 217 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 MX2P20592 715 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 PSMB4P28070 264 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 GRIA1P42261 906 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 MAGEA11P43364 429 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SERPINB9P50453 376 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 CDK7P50613 346 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 PRMT2P55345 433 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 AP1B1Q10567 949 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 GPNMBQ14956 572 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 FAM182AQ5T1J6 154 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SYCP2LQ5T4T6 812 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 LVRNQ6Q4G3 990 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TIFABQ6ZNK6 161 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SPATA21Q7Z572 469 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SCD5Q86SK9 330 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 LRRC6Q86X45 466 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 ZNF280BQ86YH2 543 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SPATA2LQ8IUW3 424 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 TP53INP2Q8IXH6 220 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 C10orf67Q8IYJ2 551 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms