RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 A0A1W2PP55 124 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 A0A1W2PR77 199 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 PIK3R2O00459 728 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ATXN7O15265 892 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 MID1O15344 667 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 SIN3BO75182 1162 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 CALCAP01258 141 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 DNTTP04053 509 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 DLDP09622 509 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 JUPP14923 745 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ACADVLP49748 655 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 BCAT1P54687 386 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 PKP1Q13835 747 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 GOLGA7BQ2TAP0 167 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 FSCBQ5H9T9 825 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ADGRF1Q5T601 910 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 HES3Q5TGS1 186 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 BSPRYQ5W0U4 402 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ARHGAP17Q68EM7 881 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 NADSYN1Q6IA69 706 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ADAT2Q7Z6V5 191 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 UBA3Q8TBC4 463 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 TSC1Q92574 1164 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 TMEM176AQ96HP8 235 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 PRICKLE1Q96MT3 831 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 ELF4Q99607 663 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
TRAF4-209ENST00000473421 EXOC1Q9NV70 894 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 FBXL12Q9NXK8 326 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
TRAF4-209ENST00000473421 TTC34A8MYJ7 566 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 TBL1XO60907 577 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 LDOC1O95751 146 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 NR2F2P24468 414 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 ME1P48163 572 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 RACK1P63244 317 aaKnown RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 C9orf64Q5T6V5 341 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 KANSL1Q7Z3B3 1105 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 AHI1Q8N157 1196 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 AADATQ8N5Z0 425 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 GANCQ8TET4 914 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 WFIKKN2Q8TEU8 576 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 FAM129BQ96TA1 746 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
TRAF4-209ENST00000473421 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 STIM2Q9P246 746 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 FRMD4BQ9Y2L6 1034 aa13.13□□□□□ -0.31
TRAF4-209ENST00000473421 RFPL3O75679 317 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 IGLV3-27P01718 113 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 CSKP41240 450 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
TRAF4-209ENST00000473421 C21orf59P57076 290 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 PPP2CBP62714 309 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
TRAF4-209ENST00000473421 PPP2CAP67775 309 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 ZBTB16Q05516 673 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 MMAAQ8IVH4 418 aaKnown RBP13.12□□□□□ -0.31
TRAF4-209ENST00000473421 FAM186BQ8IYM0 893 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 ARHGAP18Q8N392 663 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-209ENST00000473421 IMPG2Q9BZV3 1241 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 SLCO3A1Q9UIG8 710 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 TSPAN16Q9UKR8 245 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 HBS1LQ9Y450 684 aaKnown RBP13.12□□□□□ -0.31
TRAF4-209ENST00000473421 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 AK5Q9Y6K8 562 aa13.12□□□□□ -0.31
TRAF4-209ENST00000473421 A0A1B0GVL5 298 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 PYCARD-AS1I3L0S3 204 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
TRAF4-209ENST00000473421 BRINP1O60477 761 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 ITGAVP06756 1048 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 LCP1P13796 627 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 VAV1P15498 845 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 POLR2EP19388 210 aaKnown RBP13.11□□□□□ -0.31
TRAF4-209ENST00000473421 RGS7P49802 495 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-209ENST00000473421 RTP5Q14D33 572 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms