RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 EXD1Q8NHP7 514 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 FAM71BQ8TC56 605 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 FGF14Q92915 247 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 ELSPBP1Q96BH3 223 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 RBM41Q96IZ5 413 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 RPGRIP1Q96KN7 1286 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 C1orf74Q96LT6 269 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 PSMB7Q99436 277 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 PRMT1Q99873 361 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 CALN1Q9BXU9 219 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 TBC1D14Q9P2M4 693 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 VANGL2Q9ULK5 521 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 WNT6Q9Y6F9 365 aa12.97□□□□□ -0.33
TRAPPC12-217ENST00000473348 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 E9PAM4 449 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 H3BRJ5 948 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 EEF2KO00418 725 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 SLC9A3R1O14745 358 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 SRGAP2O75044 1071 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ECI2O75521 394 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 LRIG2O94898 1065 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■□□□□ 11.2
TRAPPC12-217ENST00000473348 TUBB4AP04350 444 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 GOT1P17174 413 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 CXCR5P32302 372 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ARL4AP40617 200 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 IFNAR2P48551 515 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 MFSD7Q6UXD7 560 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 LRRC31Q6UY01 552 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 MAP7D3Q8IWC1 876 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZNF683Q8IZ20 524 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 LGI2Q8N0V4 545 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 DEPDC1BQ8WUY9 529 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 TSC1Q92574 1164 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 OTUB2Q96DC9 234 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 PRICKLE1Q96MT3 831 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZNF670Q9BS34 389 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 PLA2G2FQ9BZM2 168 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 CARD9Q9H257 536 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 RCOR3Q9P2K3 495 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 NEU3Q9UQ49 428 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
TRAPPC12-217ENST00000473348 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.34
TRAPPC12-217ENST00000473348 IGLV3-10A0A075B6K4 115 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ANHXE9PGG2 379 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 TRDMT1O14717 391 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 TSPAN3O60637 253 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 PYGMP11217 842 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 PSMC3P17980 439 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 HTR7P34969 479 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 CHKAP35790 457 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 CDKN2BP42772 138 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 IRAK1P51617 712 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 SGSHP51688 502 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 FCHO2Q0JRZ9 810 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 GRM2Q14416 872 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 TAZQ16635 292 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 RABGAP1LQ5R372 815 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 PAPD7Q5XG87 772 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 FBXL22Q6P050 247 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 VSIG1Q86XK7 387 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 MFSD6LQ8IWD5 586 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ZDHHC14Q8IZN3 488 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 IGSF8Q969P0 613 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 MYEOVQ96EZ4 313 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ASIC4Q96FT7 647 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 CSPG4P5Q96PW8 444 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 LINC00597Q9H2U6 94 aa12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 THG1LQ9NWX6 298 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 DUS2Q9NX74 493 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-217ENST00000473348 hCG_1818297A0A087WSY0 165 aa12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 ZNF487B1APH4 448 aa12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 GFRA2O00451 464 aa12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 DAPK3O43293 454 aa12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 TCP1P17987 556 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 IL4RP24394 825 aa12.94□□□□□ -0.34
TRAPPC12-217ENST00000473348 EPHB2P29323 1055 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms