RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ID3Q02535 119 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 SCN1BQ07699 218 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 MALLQ13021 153 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 IKQ13123 557 aaPredicted RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 TUSC3Q13454 348 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 ITGA7Q13683 1181 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 TESK1Q15569 626 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 TRADDQ15628 312 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 AOC3Q16853 763 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 KRT71Q3SY84 523 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 PPM1JQ5JR12 505 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 KHDC1LQ5JSQ8 128 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 C9orf152Q5JTZ5 239 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 E4F1Q66K89 784 aaPredicted RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 ZCCHC12Q6PEW1 402 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 CRELD2Q6UXH1 353 aaPredicted RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 PTCHD4Q6ZW05 846 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 UNC13DQ70J99 1090 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 ARMC9Q7Z3E5 817 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 CDH24Q86UP0 819 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 LRRC49Q8IUZ0 686 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 LINC00346Q8IVM7 164 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 CNTROBQ8N137 903 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 RTL3Q8N8U3 475 aaKnown RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 NFKBIDQ8NI38 313 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 HASPINQ8TF76 798 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 SLC22A17Q8WUG5 538 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 KCNE4Q8WWG9 221 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 SLC5A11Q8WWX8 675 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 MRPS27Q92552 414 aaKnown RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 RAPGEF5Q92565 580 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 C3orf49Q96BT1 292 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 NRBF2Q96F24 287 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 EPSTI1Q96J88 318 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 GCNAQ96QF7 691 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 WNT5BQ9H1J7 359 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 MRPL46Q9H2W6 279 aaKnown RBP6.26□□□□□ -1.41
RTF1-203ENST00000473214 EHD1Q9H4M9 534 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 PIDD1Q9HB75 910 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 TRPV5Q9NQA5 729 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 QPCTLQ9NXS2 382 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 FBXO40Q9UH90 709 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 PLAGL2Q9UPG8 496 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 DNAJC16Q9Y2G8 782 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 PCDHA2Q9Y5H9 948 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 CAPN7Q9Y6W3 813 aa6.26□□□□□ -1.41
RTF1-203ENST00000473214 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 WDR19Q8NEZ3 1342 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 NWD2Q9ULI1 1742 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 VWA3AA6NCI4 1184 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 C16orf96A6NNT2 1141 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 E7EVH7 732 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 PSMD14O00487 310 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 VWA5AO00534 786 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 LEFTY1O75610 366 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SLITRK3O94933 977 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CEACAM5P06731 702 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SPARCP09486 303 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SUPT20HL2P0C7V6 817 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CPA1P15085 419 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SFPQP23246 707 aaKnown RBP eCLIP6.25□□□□□ -1.41
RTF1-203ENST00000473214 MAGEA4P43358 317 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CARSP49589 748 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 STAT5BP51692 787 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 GBX2P52951 348 aaPredicted RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 ATXN3P54252 364 aaPredicted RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 HAND2P61296 217 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 LMAN2Q12907 356 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 NPRL3Q12980 569 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 TMEM132BQ14DG7 1078 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 PDK1Q15118 436 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 NTRK2Q16620 822 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CCDC57Q2TAC2 916 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 RBM20Q5T481 1227 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 CPZQ66K79 652 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 PM20D1Q6GTS8 502 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SUSD1Q6UWL2 747 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 HHIPL2Q6UWX4 724 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CCDC80Q76M96 950 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 ATG9AQ7Z3C6 839 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CACNA2D4Q7Z3S7 1137 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 MTERF4Q7Z6M4 381 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 FAM217AQ8IXS0 508 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 CCDC105Q8IYK2 499 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 MRPL43Q8N983 215 aaKnown RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 RCBTB1Q8NDN9 531 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 BHLHE22Q8NFJ8 381 aaPredicted RBP6.25□□□□□ -1.41
RTF1-203ENST00000473214 CPT1CQ8TCG5 803 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 WASF1Q92558 559 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 MR1Q95460 341 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 SNX27Q96L92 541 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 RBM15Q96T37 977 aaKnown RBP eCLIP6.25□□□□□ -1.41
RTF1-203ENST00000473214 AGAP2Q99490 1192 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 MCMBPQ9BTE3 642 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 ADI1Q9BV57 179 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 DUSP23Q9BVJ7 150 aa6.25□□□□□ -1.41
RTF1-203ENST00000473214 HERC2P3Q9BVR0 1158 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms