RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 ZNF449Q6P9G9 518 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 RTL10Q7L3V2 364 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 HEATR3Q7Z4Q2 680 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 DNAJB7Q7Z6W7 309 aaPredicted RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 DCP1BQ8IZD4 617 aaKnown RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 LRRC71Q8N4P6 559 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 GLIS1Q8NBF1 620 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 FAM71BQ8TC56 605 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 CSGALNACT1Q8TDX6 532 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 AFG1LQ8WV93 481 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 RFFLQ8WZ73 363 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 LRRC46Q96FV0 321 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 MRGPRX4Q96LA9 322 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 COG8Q96MW5 612 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 TSPAN18Q96SJ8 248 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 MYCBPQ99417 103 aaPredicted RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 MPHOSPH8Q99549 860 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 P2RX7Q99572 595 aaKnown RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 VRK1Q99986 396 aaPredicted RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 GDF15Q99988 308 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 TREX2Q9BQ50 279 aaPredicted RBP4.52□□□□□ -1.69
CTSS-203ENST00000472977 SLF1Q9BQI6 1058 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 SLCO5A1Q9H2Y9 848 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 JMJD4Q9H9V9 463 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 LMBRD1Q9NUN5 540 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 TMEM160Q9NX00 188 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 NSMCE4AQ9NXX6 385 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 ABCF2Q9UG63 623 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 CNPY2Q9Y2B0 182 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 PCDHGB5Q9Y5G0 923 aa4.52□□□□□ -1.69
CTSS-203ENST00000472977 PI4KAP2A4QPH2 592 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 PABPN1LA6NDY0 278 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 C4orf47A7E2U8 309 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 ASNA1O43681 348 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 DKC1O60832 514 aaKnown RBP eCLIP4.51□□□□□ -1.69
CTSS-203ENST00000472977 PTP4A3O75365 173 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 HSPA4LO95757 839 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 STARD3NLO95772 234 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 HSP90AB1P08238 724 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 TYRP14679 529 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 CTNNA1P35221 906 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 TOB1P50616 345 aaPredicted RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 BPIFB3P59826 476 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 TCF15Q12870 199 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 KHDC1Q4VXA5 237 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 HECTD3Q5T447 861 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 ANKRD45Q5TZF3 282 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 RPUSD3Q6P087 351 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 SLC22A25Q6T423 547 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 MFSD6Q6ZSS7 791 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 USP49Q70CQ1 688 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 PARS2Q7L3T8 475 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 CARNMT1Q8N4J0 409 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 APPL2Q8NEU8 664 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 SPPL3Q8TCT6 385 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 ST8SIA4Q92187 359 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 MAML1Q92585 1016 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 HDAC10Q969S8 669 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 TBC1D31Q96DN5 1066 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 MSLNLQ96KJ4 702 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 MRGPRX1Q96LB2 322 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 SIL1Q9H173 461 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 KRT84Q9NSB2 600 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 RLIMQ9NVW2 624 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 ADD3Q9UEY8 706 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 PCDHGB4Q9UN71 923 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 PCDHA1Q9Y5I3 950 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 RAD54BQ9Y620 910 aa4.51□□□□□ -1.69
CTSS-203ENST00000472977 CFAP20Q9Y6A4 193 aaKnown RBP4.51□□□□□ -1.69
CTSS-203ENST00000472977 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 GTPBP10A4D1E9 387 aaKnown RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 HMX3A6NHT5 357 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 ISM1B1AKI9 464 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 F5H0A9 414 aaPredicted RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 UBE2Q2LH0YL09 131 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 H7C0S8 307 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 SPTLC2O15270 562 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 FAM155BO75949 473 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 TJP3O95049 919 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 HNRNPA1P09651 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
CTSS-203ENST00000472977 RXRAP19793 462 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 HOXD13P35453 343 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 PIK3CAP42336 1068 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 CDKN2AP42771 156 aaKnown RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 GCLCP48506 637 aaPredicted RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 CTCFP49711 727 aaPredicted RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 ZNF135P52742 658 aaPredicted RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 COPAP53621 1224 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 PSMC1P62191 440 aaKnown RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 GHRHRQ02643 423 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 TLE2Q04725 743 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 PKN2Q16513 984 aaKnown RBP4.5□□□□□ -1.69
CTSS-203ENST00000472977 ZNF585BQ52M93 769 aa4.5□□□□□ -1.69
CTSS-203ENST00000472977 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms