RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FAM149B1Q96BN6 582 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 GTPBP2Q9BX10 602 aaKnown RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 ACP6Q9NPH0 428 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 WASF3Q9UPY6 502 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 GTPBP10A4D1E9 387 aaKnown RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 BECN2A8MW95 431 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 THAP12O43422 761 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 OPHN1O60890 802 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 POLR2EP19388 210 aaKnown RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 GNA15P30679 374 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 YWHAZP63104 245 aaKnown RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 EIF4EBP2Q13542 120 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 PLEKHG6Q3KR16 790 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 MS4A13Q5J8X5 152 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 GBP6Q6ZN66 633 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 CREBRFQ8IUR6 639 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 HDDC3Q8N4P3 179 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 WDTC1Q8N5D0 677 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 MINDY1Q8N5J2 469 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 HJURPQ8NCD3 748 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 TTC17Q96AE7 1141 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 MYEOVQ96EZ4 313 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 PRICKLE1Q96MT3 831 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 SLC32A1Q9H598 525 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 PRSS16Q9NQE7 514 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 DNAAF2Q9NVR5 837 aaKnown RBP15.87■□□□□ 0.13
VTI1A-203ENST00000472892 APEX2Q9UBZ4 518 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 CHD8Q9HCK8 2581 aa15.87■□□□□ 0.13
VTI1A-203ENST00000472892 PCDH15Q96QU1 1955 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 ASCC3Q8N3C0 2202 aaKnown RBP15.86■□□□□ 0.13
VTI1A-203ENST00000472892 CKAP5Q14008 2032 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 E5RJQ4 531 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 CAPN9O14815 690 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 IGLV3-25P01717 112 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 PON1P27169 355 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 RPS24P62847 133 aaKnown RBP15.86■□□□□ 0.13
VTI1A-203ENST00000472892 APBA1Q02410 837 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 EXOC3L4Q17RC7 722 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 DCAF12L1Q5VU92 463 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 TAC4Q86UU9 113 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 MFN1Q8IWA4 741 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 ZNF366Q8N895 744 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 ADAM32Q8TC27 787 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 SHC3Q92529 594 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 SPOCK2Q92563 424 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 NUCKS1Q9H1E3 243 aaKnown RBP15.86■□□□□ 0.13
VTI1A-203ENST00000472892 PCED1AQ9H1Q7 454 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 LHX5Q9H2C1 402 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 THAP9Q9H5L6 903 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 FBRSQ9HAH7 460 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 POPDC2Q9HBU9 364 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 STIM2Q9P246 746 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 SUN2Q9UH99 717 aa15.86■□□□□ 0.13
VTI1A-203ENST00000472892 KMT2BQ9UMN6 2715 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 A0A1B0GTW7 788 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 TYW5A2RUC4 315 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 MEI4A8MW99 385 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 GJB3O75712 270 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 TRUB2O95900 331 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 CD59P13987 128 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 RPS14P62263 151 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 ZBTB16Q05516 673 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 SLC14A1Q13336 389 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 PDCLQ13371 301 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 ST3GAL2Q16842 350 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 ARHGAP44Q17R89 818 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 ZC3H12AQ5D1E8 599 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 OR2I1PQ8NGU4 316 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 C1orf216Q8TAB5 229 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 MYO19Q96H55 970 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 ZDHHC5Q9C0B5 715 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 CHMP5Q9NZZ3 219 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 XPO7Q9UIA9 1087 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 INTS6Q9UL03 887 aaKnown RBP15.85■□□□□ 0.13
VTI1A-203ENST00000472892 PCDHGC3Q9UN70 934 aa15.85■□□□□ 0.13
VTI1A-203ENST00000472892 GLI1P08151 1106 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 USP8P40818 1118 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 CSKP41240 450 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 FOXC1Q12948 553 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 ARID5BQ14865 1188 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 TAF5Q15542 800 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 DCAF6Q58WW2 860 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 FSCBQ5H9T9 825 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 FAM124AQ86V42 546 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 CACUL1Q86Y37 369 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 CFAP52Q8N1V2 620 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 CARNMT1Q8N4J0 409 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 KDM1BQ8NB78 822 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 BTN2A3PQ96KV6 586 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 MRGPRX3Q96LB0 322 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 SIX2Q9NPC8 291 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
VTI1A-203ENST00000472892 TJP2Q9UDY2 1190 aa15.84■□□□□ 0.13
VTI1A-203ENST00000472892 MUC22E2RYF6 1773 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 BCAT2O15382 392 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 KRT37O76014 449 aa15.83■□□□□ 0.12
VTI1A-203ENST00000472892 LUC7L3O95232 432 aaKnown RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 MOCS2O96007 188 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-203ENST00000472892 APOEP02649 317 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms