RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ERBB2P04626 1255 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 NOS2P35228 1153 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 ATXN1P54253 815 aaKnown RBP20.14■□□□□ 0.81
COMMD1-208ENST00000472729 FUT11Q495W5 492 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 PLA2G2CQ5R387 149 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 SYCP2LQ5T4T6 812 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 RNF219Q5W0B1 726 aaPredicted RBP20.14■□□□□ 0.81
COMMD1-208ENST00000472729 RAP1GAP2Q684P5 730 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 MBLAC2Q68D91 279 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 NADSYN1Q6IA69 706 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 LRSAM1Q6UWE0 723 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 TMPRSS6Q8IU80 811 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 CFAP52Q8N1V2 620 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 FIBINQ8TAL6 211 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 SLC2A13Q96QE2 648 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 NAA15Q9BXJ9 866 aaKnown RBP20.14■□□□□ 0.81
COMMD1-208ENST00000472729 NUCKS1Q9H1E3 243 aaKnown RBP20.14■□□□□ 0.81
COMMD1-208ENST00000472729 SMOC1Q9H4F8 434 aa20.14■□□□□ 0.81
COMMD1-208ENST00000472729 SLC30A4O14863 429 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 GDF9O60383 454 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 GFPT2O94808 682 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 DLDP09622 509 aaKnown RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 TACR2P21452 398 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 KCNA4P22459 653 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 STAT1P42224 750 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 SGSHP51688 502 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 COPB1P53618 953 aaKnown RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 RPS24P62847 133 aaKnown RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 TYRO3Q06418 890 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 PTPN20Q4JDL3 420 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 FAM102AQ5T9C2 384 aaPredicted RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 RNF43Q68DV7 783 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 OLFML1Q6UWY5 402 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 SLC26A9Q7LBE3 791 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 ZNF677Q86XU0 584 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 SYT12Q8IV01 421 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 FRMD1Q8N878 549 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 CYB5D2Q8WUJ1 264 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 PPP1R9BQ96SB3 815 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 NUSAP1Q9BXS6 441 aaKnown RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 NLRC4Q9NPP4 1024 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 KIAA1522Q9P206 1035 aaPredicted RBP20.13■□□□□ 0.81
COMMD1-208ENST00000472729 SUN2Q9UH99 717 aa20.13■□□□□ 0.81
COMMD1-208ENST00000472729 SMTNL1A8MU46 457 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 M0QYT0 321 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 DAB1O75553 588 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 F9P00740 461 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 ASLP04424 464 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 OXTRP30559 389 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 CD70P32970 193 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 MATKP42679 507 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 OXCT1P55809 520 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 TTC39BQ5VTQ0 682 aaPredicted RBP20.12■□□□□ 0.81
COMMD1-208ENST00000472729 TMEM215Q68D42 235 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 RABEPKQ7Z6M1 372 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 ADIPOR2Q86V24 386 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 DEFB119Q8N690 84 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 FOXJ1Q92949 421 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 RPRD1AQ96P16 312 aaPredicted RBP20.12■□□□□ 0.81
COMMD1-208ENST00000472729 SLC6A17Q9H1V8 727 aa20.12■□□□□ 0.81
COMMD1-208ENST00000472729 LIMA1Q9UHB6 759 aaKnown RBP20.12■□□□□ 0.81
COMMD1-208ENST00000472729 MBD1Q9UIS9 605 aaPredicted RBP20.12■□□□□ 0.81
COMMD1-208ENST00000472729 ATG2BQ96BY7 2078 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 DCDC2BA2VCK2 349 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 LUC7L3O95232 432 aaKnown RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 IGLV3-25P01717 112 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 CCDC172P0C7W6 258 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 PRKCHP24723 683 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 CD6P30203 668 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 SOX5P35711 763 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 NNMTP40261 264 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 PTGER3P43115 390 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 ATXN3P54252 364 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 LMAN2Q12907 356 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 ENPP2Q13822 863 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 NAA35Q5VZE5 725 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 DPY19L2P1Q6NXN4 242 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 NOP9Q86U38 636 aaKnown RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 RGL4Q8IZJ4 473 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 AOPEPQ8N6M6 819 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 ZNF397Q8NF99 534 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 CEP76Q8TAP6 659 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 PRICKLE1Q96MT3 831 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 EDEM2Q9BV94 578 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 WDCPQ9H6R7 721 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 FBRSQ9HAH7 460 aa20.11■□□□□ 0.81
COMMD1-208ENST00000472729 XPO7Q9UIA9 1087 aaKnown RBP20.11■□□□□ 0.81
COMMD1-208ENST00000472729 IGHV1OR15-9A0A0B4J2B8 117 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 LGALS16A8MUM7 142 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 GOLGA8SH3BPF8 625 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 RNASEH1O60930 286 aaKnown RBP20.1■□□□□ 0.81
COMMD1-208ENST00000472729 CFIP05156 583 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 MMEP08473 750 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 HLA-EP13747 358 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 HOXD12P35452 270 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 KLK7P49862 253 aa20.1■□□□□ 0.81
COMMD1-208ENST00000472729 SULT1E1P49888 294 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms