RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 HOXD9P28356 352 aaPredicted RBP20.65■□□□□ 0.9
SF1-213ENST00000472725 HTR7P34969 479 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 MAGEA9P43362 315 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 GALK1P51570 392 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 CLCN5P51795 746 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 ZNF135P52742 658 aaPredicted RBP20.65■□□□□ 0.9
SF1-213ENST00000472725 VCPP55072 806 aaKnown RBP20.65■□□□□ 0.9
SF1-213ENST00000472725 FBXO43Q4G163 708 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 BOLA3Q53S33 107 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 EFHC2Q5JST6 749 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 DGKKQ5KSL6 1271 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 FBXL22Q6P050 247 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 SCYL2Q6P3W7 929 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 RFWD3Q6PCD5 774 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 TXNDC11Q6PKC3 985 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 CCDC117Q8IWD4 279 aaPredicted RBP20.65■□□□□ 0.9
SF1-213ENST00000472725 LGI2Q8N0V4 545 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 SYNPOQ8N3V7 929 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 ANLNQ9NQW6 1124 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 PPARGC1AQ9UBK2 798 aaKnown RBP20.65■□□□□ 0.9
SF1-213ENST00000472725 SLC27A6Q9Y2P4 619 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 MIA3Q5JRA6 1907 aa20.65■□□□□ 0.9
SF1-213ENST00000472725 A0A0C4DFX4 3053 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 IGLV3-10A0A075B6K4 115 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 I6L893 689 aaPredicted RBP20.64■□□□□ 0.89
SF1-213ENST00000472725 DLL1O00548 723 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 MIPP30301 263 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 GRIA2P42262 883 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 OXCT1P55809 520 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 LRRC32Q14392 662 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 E2F5Q15329 346 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 RAB6CQ53S08 254 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 ERMARDQ5T6L9 678 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 CHST9Q7L1S5 443 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 ARFGAP1Q8N6T3 406 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 CCDC185Q8N715 623 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 PJA1Q8NG27 643 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 PRICKLE1Q96MT3 831 aaPredicted RBP20.64■□□□□ 0.89
SF1-213ENST00000472725 IER2Q9BTL4 223 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 SIK2Q9H0K1 926 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 RAB6CQ9H0N0 254 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 OSGEPQ9NPF4 335 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 DNAJC17Q9NVM6 304 aaKnown RBP20.64■□□□□ 0.89
SF1-213ENST00000472725 OR12D3Q9UGF7 316 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 FZD10Q9ULW2 581 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 USP18Q9UMW8 372 aa20.64■□□□□ 0.89
SF1-213ENST00000472725 REXO2Q9Y3B8 237 aaKnown RBP20.64■□□□□ 0.89
SF1-213ENST00000472725 A0A1B0GVM2 712 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 TCAF2A6NFQ2 919 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 DRGXA6NNA5 263 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 TSPAN3O60637 253 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 TBL1XO60907 577 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 APODP05090 189 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 L1CAMP32004 1257 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 SLC1A1P43005 524 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 DGKGP49619 791 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 PON2Q15165 354 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 HADHQ16836 314 aaKnown RBP20.63■□□□□ 0.89
SF1-213ENST00000472725 GRAMD4Q6IC98 578 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 KIAA1328Q86T90 577 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 ZNF683Q8IZ20 524 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 ZNF687Q8N1G0 1237 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 PHTF2Q8N3S3 785 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 FIBINQ8TAL6 211 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 TEKT4Q8WW24 435 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 PBXIP1Q96AQ6 731 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 RPRD1AQ96P16 312 aaPredicted RBP20.63■□□□□ 0.89
SF1-213ENST00000472725 PPP1R9BQ96SB3 815 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 VANGL2Q9ULK5 521 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 SIT1Q9Y3P8 196 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 DOCK4Q8N1I0 1966 aa20.63■□□□□ 0.89
SF1-213ENST00000472725 FAM170BA6NMN3 283 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 PRR33A8MZF0 331 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 E9PAM4 449 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 STK25O00506 426 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 CLDN11O75508 207 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 LUC7L3O95232 432 aaKnown RBP20.62■□□□□ 0.89
SF1-213ENST00000472725 CISD3P0C7P0 127 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 TNFRSF4P43489 277 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 RPS9P46781 194 aaKnown RBP20.62■□□□□ 0.89
SF1-213ENST00000472725 CDH4P55283 916 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 RPS24P62847 133 aaKnown RBP20.62■□□□□ 0.89
SF1-213ENST00000472725 KIF5AQ12840 1032 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 CCINQ13939 588 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 UBXN2BQ14CS0 331 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 C12orf40Q86WS4 652 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 FBXL6Q8N531 539 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.62■□□□□ 0.89
SF1-213ENST00000472725 NAT16Q8N8M0 369 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 ACRBPQ8NEB7 543 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 KCNV2Q8TDN2 545 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 CLDN23Q96B33 292 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 BTBD6Q96KE9 485 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 ARHGEF4Q9NR80 690 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 DONSONQ9NYP3 566 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 PLK2Q9NYY3 685 aa20.62■□□□□ 0.89
SF1-213ENST00000472725 KAT7O95251 611 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 CHRNB1P11230 501 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 AOC1P19801 751 aa20.61■□□□□ 0.89
SF1-213ENST00000472725 CD72P21854 359 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms