RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TRPV4Q9HBA0 871 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CYP4F11Q9HBI6 524 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 THG1LQ9NWX6 298 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 OBP2AQ9NY56 170 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 RGL1Q9NZL6 768 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 NTMQ9P121 344 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 WRAP73Q9P2S5 460 aaPredicted RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 HSFX1Q9UBD0 423 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ORC3Q9UBD5 711 aaPredicted RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 AFF4Q9UHB7 1163 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 DSEQ9UL01 958 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 KCNJ14Q9UNX9 436 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 TNFSF13BQ9Y275 285 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ASB3Q9Y575 518 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 PCDHA9Q9Y5H5 950 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 INSL5Q9Y5Q6 135 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 PIAS3Q9Y6X2 628 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 EP300Q09472 2414 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 OR6C75A6NL08 312 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 K7ERI5 159 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 K7ESM1 405 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PODXLO00592 558 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PTGESO14684 152 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 SLC30A4O14863 429 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 CHADO15335 359 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 B4GALT5O43286 388 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 SLC26A4O43511 780 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 TOM1L1O75674 476 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ABLIM3O94929 683 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 IL18BPO95998 194 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PYGMP11217 842 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ODC1P11926 461 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 KCNE1P15382 129 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 FAHP16930 419 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ZNF28P17035 718 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 RPL17P18621 184 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 CYP3A5P20815 502 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 DDX6P26196 483 aaKnown RBP eCLIP3.79□□□□□ -1.8
XRN1-209ENST00000472625 RPL13P26373 211 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 CDC25CP30307 473 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 HOXA6P31267 233 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 DPP6P42658 865 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ALDH1A3P47895 512 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 CXCL12P48061 93 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PDE6CP51160 858 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 MECP2P51608 486 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 CLCNKBP51801 687 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 LIMK1P53667 647 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 GABREP78334 506 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 YWHAHQ04917 246 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 GRIN1Q05586 938 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 FCHO2Q0JRZ9 810 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 MTAPQ13126 283 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 SIM2Q14190 667 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 NOLC1Q14978 699 aaKnown RBP eCLIP3.79□□□□□ -1.8
XRN1-209ENST00000472625 CSRP2Q16527 193 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 SPATS1Q496A3 300 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ARHGAP29Q52LW3 1261 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 KRT79Q5XKE5 535 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 LMBRD2Q68DH5 695 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 ARMCX5Q6P1M9 558 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PRSS55Q6UWB4 352 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 TAS1R1Q7RTX1 841 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 RALGPS2Q86X27 583 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 MFSD6LQ8IWD5 586 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 CD302Q8IX05 232 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 DTX3Q8N9I9 347 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 KYQ8NBH2 561 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ADAMTS17Q8TE56 1095 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 HASPINQ8TF76 798 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 UBXN4Q92575 508 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 TOE1Q96GM8 510 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 B3GALT6Q96L58 329 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 ACAP3Q96P50 834 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PPP1R10Q96QC0 940 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 MTMR9Q96QG7 549 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 KCNJ15Q99712 375 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 LLPHQ9BRT6 129 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 TCHPQ9BT92 498 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 CD244Q9BZW8 370 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 FOXP1Q9H334 677 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 KIF9Q9HAQ2 790 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PLEKHA5Q9HAU0 1116 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 HEBP1Q9NRV9 189 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 LARSQ9P2J5 1176 aaKnown RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 DNM3Q9UQ16 869 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 COA3Q9Y2R0 106 aaPredicted RBP3.79□□□□□ -1.8
XRN1-209ENST00000472625 GDAQ9Y2T3 454 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 PCDHGA5Q9Y5G8 931 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 NCOR2Q9Y618 2525 aa3.79□□□□□ -1.8
XRN1-209ENST00000472625 OTOGLQ3ZCN5 2332 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 EPG5Q9HCE0 2579 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 SMIM28A0A1B0GU29 152 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 TCRBV16S1A1N1A0A5B0 115 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 MED19A0JLT2 244 aaPredicted RBP3.78□□□□□ -1.8
XRN1-209ENST00000472625 WDR27A2RRH5 827 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 CCDC169A6NNP5 214 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 F8W810 466 aa3.78□□□□□ -1.8
XRN1-209ENST00000472625 ADAMTS3O15072 1205 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms