RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ARHGAP18Q8N392 663 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 OXR1Q8N573 874 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 OR2T34Q8NGX1 318 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 MORC2Q9Y6X9 1032 aaPredicted RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 TLR4O00206 839 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 CD2BP2O95400 341 aaKnown RBP19.82■□□□□ 0.76
SORT1-203ENST00000471996 HARS2P49590 506 aaKnown RBP19.82■□□□□ 0.76
SORT1-203ENST00000471996 CCR5P51681 352 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 E2F1Q01094 437 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 AMPD3Q01432 767 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 KDM7AQ6ZMT4 941 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 TTC9Q92623 222 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 TMA16Q96EY4 203 aaKnown RBP19.82■□□□□ 0.76
SORT1-203ENST00000471996 NEUROG2Q9H2A3 272 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 MTG2Q9H4K7 406 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 STOML2Q9UJZ1 356 aa19.82■□□□□ 0.76
SORT1-203ENST00000471996 MYLKQ15746 1914 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 A0A1W2PP55 124 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
SORT1-203ENST00000471996 RNASEH1O60930 286 aaKnown RBP19.81■□□□□ 0.76
SORT1-203ENST00000471996 MT-CO3P00414 261 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 POLR2EP19388 210 aaKnown RBP19.81■□□□□ 0.76
SORT1-203ENST00000471996 YWHAGP61981 247 aaKnown RBP eCLIP19.81■□□□□ 0.76
SORT1-203ENST00000471996 DLG4P78352 724 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 EHHADHQ08426 723 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 E2F4Q16254 413 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 PROX2Q3B8N5 592 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 SLC45A4Q5BKX6 768 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 FAM173BQ6P4H8 233 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 DHX40Q8IX18 779 aaKnown RBP19.81■□□□□ 0.76
SORT1-203ENST00000471996 SERAC1Q96JX3 654 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 CUEDC2Q9H467 287 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 PCDHB1Q9Y5F3 818 aa19.81■□□□□ 0.76
SORT1-203ENST00000471996 PLXNA2O75051 1894 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 MID1O15344 667 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 SIN3BO75182 1162 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 CST6Q15828 149 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 KNOP1Q1ED39 458 aaKnown RBP19.8■□□□□ 0.76
SORT1-203ENST00000471996 PPP1R26Q5T8A7 1209 aaPredicted RBP19.8■□□□□ 0.76
SORT1-203ENST00000471996 SV2AQ7L0J3 742 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 SNRNP27Q8WVK2 155 aaKnown RBP19.8■□□□□ 0.76
SORT1-203ENST00000471996 MYO19Q96H55 970 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 CYP3A43Q9HB55 503 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 FZD4Q9ULV1 537 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 SPTA1P02549 2419 aa19.8■□□□□ 0.76
SORT1-203ENST00000471996 SLC28A2O43868 658 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 RNASEH2AO75792 299 aaKnown RBP19.79■□□□□ 0.76
SORT1-203ENST00000471996 DXOO77932 396 aaKnown RBP19.79■□□□□ 0.76
SORT1-203ENST00000471996 CD70P32970 193 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 SLC39A14Q15043 492 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 HNRNPA1L2Q32P51 320 aaKnown RBP19.79■□□□□ 0.76
SORT1-203ENST00000471996 ADGRF1Q5T601 910 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 UNC13DQ70J99 1090 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 SPATS2Q86XZ4 545 aaKnown RBP19.79■□□□□ 0.76
SORT1-203ENST00000471996 LSMEM2Q8N112 164 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 GOLGA5Q8TBA6 731 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 WFDC5Q8TCV5 224 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 MED8Q96G25 268 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 OMDQ99983 421 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 C7orf25Q9BPX7 421 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 UBXN6Q9BZV1 441 aa19.79■□□□□ 0.76
SORT1-203ENST00000471996 TPX2Q9ULW0 747 aaKnown RBP19.79■□□□□ 0.76
SORT1-203ENST00000471996 LATS1O95835 1130 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 HLA-DRAP01903 254 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 MPOP05164 745 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 SLFN14P0C7P3 912 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 SGSHP51688 502 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 ST8SIA6P61647 398 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 VAC14Q08AM6 782 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 RAB41Q5JT25 222 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 MFSD2AQ8NA29 543 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 KCNE4Q8WWG9 221 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 SLC39A2Q9NP94 309 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 OLA1Q9NTK5 396 aaKnown RBP19.78■□□□□ 0.76
SORT1-203ENST00000471996 DMAC2Q9NW81 257 aa19.78■□□□□ 0.76
SORT1-203ENST00000471996 HBS1LQ9Y450 684 aaKnown RBP19.78■□□□□ 0.76
SORT1-203ENST00000471996 TRIM38O00635 465 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 KLK10O43240 276 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 SIGLEC6O43699 453 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 CD58P19256 250 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 SLC8A1P32418 973 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 PIK3CAP42336 1068 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 ERVPABLB-1P60509 514 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 ZNF211Q13398 564 aaPredicted RBP19.77■□□□□ 0.76
SORT1-203ENST00000471996 MPP7Q5T2T1 576 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 PIGZQ86VD9 579 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 MMAAQ8IVH4 418 aaKnown RBP19.77■□□□□ 0.76
SORT1-203ENST00000471996 TTC17Q96AE7 1141 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 USP28Q96RU2 1077 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 BACH2Q9BYV9 841 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 DPH1Q9BZG8 443 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 DNAI2Q9GZS0 605 aa19.77■□□□□ 0.76
SORT1-203ENST00000471996 APOBEC3GQ9HC16 384 aaKnown RBP19.77■□□□□ 0.76
SORT1-203ENST00000471996 IKBKBO14920 756 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 ADPRHP54922 357 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 GABREP78334 506 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 ARID5BQ14865 1188 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 C9orf64Q5T6V5 341 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms