RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GNA15P30679 374 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 NNTQ13423 1086 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 DCAF12L1Q5VU92 463 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 SYPL2Q5VXT5 272 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 GJB7Q6PEY0 223 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 FAM124AQ86V42 546 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 MFN1Q8IWA4 741 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 SLC39A13Q96H72 371 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 FAM81BQ96LP2 452 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 PRICKLE1Q96MT3 831 aaPredicted RBP23.4■■□□□ 1.34
C9orf3-213ENST00000471978 TRIM62Q9BVG3 475 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 SLC4A5Q9BY07 1137 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 ACP6Q9NPH0 428 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 CYTH4Q9UIA0 394 aa23.4■■□□□ 1.34
C9orf3-213ENST00000471978 TYW5A2RUC4 315 aaKnown RBP23.39■■□□□ 1.33
C9orf3-213ENST00000471978 E5RJQ4 531 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 PAPSS1O43252 624 aaPredicted RBP23.39■■□□□ 1.33
C9orf3-213ENST00000471978 KRT37O76014 449 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 SLC9A1P19634 815 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 BEND5Q7L4P6 421 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 TMEM110Q86TL2 294 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 TAC4Q86UU9 113 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 FIBINQ8TAL6 211 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 MIR1-1HGQ9H1L0 117 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 LHX5Q9H2C1 402 aa23.39■■□□□ 1.33
C9orf3-213ENST00000471978 DNAAF2Q9NVR5 837 aaKnown RBP23.39■■□□□ 1.33
C9orf3-213ENST00000471978 MUC22E2RYF6 1773 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-213ENST00000471978 A0A1B0GTW7 788 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 METTL12A8MUP2 240 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 MOCS2O96007 188 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-213ENST00000471978 USP8P40818 1118 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 RPS24P62847 133 aaKnown RBP23.38■■□□□ 1.33
C9orf3-213ENST00000471978 ARHGAP44Q17R89 818 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 MS4A13Q5J8X5 152 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 GBP6Q6ZN66 633 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 CARNMT1Q8N4J0 409 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 ZCCHC9Q8N567 271 aaKnown RBP23.38■■□□□ 1.33
C9orf3-213ENST00000471978 MYEOVQ96EZ4 313 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 MED15Q96RN5 788 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 NUCKS1Q9H1E3 243 aaKnown RBP23.38■■□□□ 1.33
C9orf3-213ENST00000471978 FBRSQ9HAH7 460 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 PRSS16Q9NQE7 514 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 APEX2Q9UBZ4 518 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 WASF3Q9UPY6 502 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 ASPMQ8IZT6 3477 aa23.38■■□□□ 1.33
C9orf3-213ENST00000471978 SPAARA0A1B0GVQ0 90 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 SPINK2P20155 84 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 YWHAZP63104 245 aaKnown RBP23.37■■□□□ 1.33
C9orf3-213ENST00000471978 APBA1Q02410 837 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 GRIK2Q13002 908 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 EXOC3L4Q17RC7 722 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 CCDC117Q8IWD4 279 aaPredicted RBP23.37■■□□□ 1.33
C9orf3-213ENST00000471978 LMLNQ96KR4 655 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 ZDHHC5Q9C0B5 715 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 POPDC2Q9HBU9 364 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 SUN2Q9UH99 717 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 CACNA1EQ15878 2313 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 AKAP13Q12802 2813 aa23.37■■□□□ 1.33
C9orf3-213ENST00000471978 BECN2A8MW95 431 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 TOP3BO95985 862 aaKnown RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 APOEP02649 317 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 C7P10643 843 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 CD59P13987 128 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 RPS14P62263 151 aaKnown RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 SIM1P81133 766 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 PDCLQ13371 301 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 CDH18Q13634 790 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 ZC3H12AQ5D1E8 599 aaKnown RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 IRF2BP1Q8IU81 584 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 CFAP52Q8N1V2 620 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 TTC17Q96AE7 1141 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 THAP9Q9H5L6 903 aa23.36■■□□□ 1.33
C9orf3-213ENST00000471978 EIF2B4Q9UI10 523 aaKnown RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 XPO7Q9UIA9 1087 aaKnown RBP23.36■■□□□ 1.33
C9orf3-213ENST00000471978 BCAT2O15382 392 aaPredicted RBP23.35■■□□□ 1.33
C9orf3-213ENST00000471978 GJB3O75712 270 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 TRUB2O95900 331 aaKnown RBP23.35■■□□□ 1.33
C9orf3-213ENST00000471978 DNTTP04053 509 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 ACSL1P33121 698 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 CSKP41240 450 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 MTIF2P46199 727 aaKnown RBP23.35■■□□□ 1.33
C9orf3-213ENST00000471978 ST8SIA6P61647 398 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 ZBTB16Q05516 673 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 SLC14A1Q13336 389 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 DCAF6Q58WW2 860 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 LGI2Q8N0V4 545 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 MLKLQ8NB16 471 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 PCED1AQ9H1Q7 454 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 C6orf106Q9H6K1 298 aaPredicted RBP23.35■■□□□ 1.33
C9orf3-213ENST00000471978 INTS6Q9UL03 887 aaKnown RBP23.35■■□□□ 1.33
C9orf3-213ENST00000471978 PCNX2A6NKB5 2137 aa23.35■■□□□ 1.33
C9orf3-213ENST00000471978 GTPBP10A4D1E9 387 aaKnown RBP23.34■■□□□ 1.33
C9orf3-213ENST00000471978 LUC7L3O95232 432 aaKnown RBP23.34■■□□□ 1.33
C9orf3-213ENST00000471978 ASLP04424 464 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 PON1P27169 355 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 TAF5Q15542 800 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 TPD52L1Q16890 204 aaPredicted RBP23.34■■□□□ 1.33
C9orf3-213ENST00000471978 FSCBQ5H9T9 825 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 RAP1GAP2Q684P5 730 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 MMS22LQ6ZRQ5 1243 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms