RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MTA1Q13330 715 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 PDCLQ13371 301 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 IQCB1Q15051 598 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 ARHGAP44Q17R89 818 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 GJB7Q6PEY0 223 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 KIAA1324Q6UXG2 1013 aaKnown RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 CHST9Q7L1S5 443 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 CCDC117Q8IWD4 279 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 FIBINQ8TAL6 211 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 PRCCQ92733 491 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 SIPA1Q96FS4 1042 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 NOX5Q96PH1 765 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 MKRN2Q9H000 416 aaKnown RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 NDST4Q9H3R1 872 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 TMEM74BQ9NUR3 256 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 ABCB8Q9NUT2 735 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 ASNSD1Q9NWL6 643 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 CYTH4Q9UIA0 394 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 GGA2Q9UJY4 613 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 SLC6A14Q9UN76 642 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 PI4KAP42356 2102 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 TNRC6BQ9UPQ9 1833 aaKnown RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 PATE3B3GLJ2 98 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 TBL1XO60907 577 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 IGLV3-19P01714 112 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 EPHX1P07099 455 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 SERPINF2P08697 491 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 DLDP09622 509 aaKnown RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 ACADMP11310 421 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 SLC6A4P31645 630 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 COPAP53621 1224 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 BPIFB4P59827 614 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 EIF4EBP2Q13542 120 aaPredicted RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 CAMK2GQ13555 558 aaPredicted RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 VWA3BQ502W6 1294 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 EFHC1Q5JVL4 640 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 WDR45BQ5MNZ6 344 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 DNTTIP2Q5QJE6 756 aaKnown RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 RFWD3Q6PCD5 774 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 ARMCX6Q7L4S7 300 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 ADIPOR2Q86V24 386 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 LUZP1Q86V48 1076 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 MFN1Q8IWA4 741 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 HJURPQ8NCD3 748 aaPredicted RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 CADM4Q8NFZ8 388 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 BTN2A3PQ96KV6 586 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 TRIM5Q9C035 493 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 TMEM245Q9H330 911 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14□□□□□ -0.17
HMGN1-211ENST00000471260 WSB2Q9NYS7 404 aaPredicted RBP14□□□□□ -0.17
HMGN1-211ENST00000471260 SUSD2Q9UGT4 822 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 SUN2Q9UH99 717 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 SLC12A6Q9UHW9 1150 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 DNAJC12Q9UKB3 198 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 CEP83Q9Y592 693 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 NCOR2Q9Y618 2525 aa14□□□□□ -0.17
HMGN1-211ENST00000471260 CKAP5Q14008 2032 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 KCNK5O95279 499 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 TRUB2O95900 331 aaKnown RBP13.99□□□□□ -0.17
HMGN1-211ENST00000471260 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 APOEP02649 317 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 ASLP04424 464 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SLC2A3P11169 496 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 POLR2EP19388 210 aaKnown RBP13.99□□□□□ -0.17
HMGN1-211ENST00000471260 CSRP1P21291 193 aaKnown RBP13.99□□□□□ -0.17
HMGN1-211ENST00000471260 KRT9P35527 623 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 TPM4P67936 248 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 ZBTB16Q05516 673 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 FNDC3BQ53EP0 1204 aaKnown RBP13.99□□□□□ -0.17
HMGN1-211ENST00000471260 MS4A13Q5J8X5 152 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SYPL2Q5VXT5 272 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 MBLAC2Q68D91 279 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 NADSYN1Q6IA69 706 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 TAC4Q86UU9 113 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SLC41A1Q8IVJ1 513 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 WDTC1Q8N5D0 677 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 ATP6V0D2Q8N8Y2 350 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 KDM1BQ8NB78 822 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 OR2T3Q8NH03 318 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SORCS1Q8WY21 1168 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 PPP1R13BQ96KQ4 1090 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 HSPA12BQ96MM6 686 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 PCED1AQ9H1Q7 454 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SLC6A17Q9H1V8 727 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 CAPN10Q9HC96 672 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 SIX2Q9NPC8 291 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 TMEM51Q9NW97 253 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 CEP192Q8TEP8 1941 aa13.99□□□□□ -0.17
HMGN1-211ENST00000471260 GOLGA6L7A0A1B0GV03 622 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 FOXN3O00409 490 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-211ENST00000471260 HSF2BPO75031 334 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 SYPP08247 313 aa13.98□□□□□ -0.17
HMGN1-211ENST00000471260 CEACAM1P13688 526 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms