RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SMAD6O43541 496 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ATG13O75143 517 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ZC3H11AO75152 810 aaKnown RBP eCLIP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PPP6R2O75170 966 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 TAF5LO75529 589 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 CNTN5O94779 1100 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 WNT1P04628 370 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ENO1P06733 434 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 RFPL3SP0C7P2 107 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 HOXB2P14652 356 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 EEF1GP26641 437 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 CCKARP32238 428 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 IL6STP40189 918 aaPredicted RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 SLC37A1P57057 533 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 TAS2R50P59544 299 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 CSHL1Q14406 222 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 SEMA3AQ14563 771 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 DLGAP5Q15398 846 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 MPEG1Q2M385 716 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 SMTNL2Q2TAL5 461 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 FAM209BQ5JX69 171 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 KIAA1755Q5JYT7 1200 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 MANEAQ5SRI9 462 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 C6orf10Q5SRN2 563 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ASPHD1Q5U4P2 390 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 LIPMQ5VYY2 423 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ARL6IP4Q66PJ3 421 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 NUGGCQ68CJ6 796 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 TTLL5Q6EMB2 1281 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 KIAA1161Q6NSJ0 714 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 LVRNQ6Q4G3 990 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 B4GALNT4Q76KP1 1039 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 MEPCEQ7L2J0 689 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 TRAPPC11Q7Z392 1133 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 RASGRP3Q8IV61 690 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM199Q8N511 208 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ARL14EPQ8N8R7 260 aaPredicted RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ACRBPQ8NEB7 543 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PJA1Q8NG27 643 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 OR52N4Q8NGI2 321 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PARD3BQ8TEW8 1205 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 IPO4Q8TEX9 1081 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 SLC22A17Q8WUG5 538 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ASB5Q8WWX0 329 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF566Q969W8 418 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 MSI2Q96DH6 328 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 C18orf8Q96DM3 657 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 FAR2Q96K12 515 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 LYZL4Q96KX0 146 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 RIPOR3Q96MK2 946 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PAAF1Q9BRP4 392 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 ABHD14AQ9BUJ0 271 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 HTATIP2Q9BUP3 242 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 CERS4Q9HA82 394 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PRDM16Q9HAZ2 1276 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 NECTIN3Q9NQS3 549 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 IPO11Q9UI26 975 aaKnown RBP1.65□□□□□ -2.15
UBXN4-207ENST00000471246 UTS2RQ9UKP6 389 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 CA14Q9ULX7 337 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 SLC8A2Q9UPR5 921 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 B3GNT3Q9Y2A9 372 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 DTNAQ9Y4J8 743 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PCDHB7Q9Y5E2 793 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 PCDHGB2Q9Y5G2 931 aa1.65□□□□□ -2.15
UBXN4-207ENST00000471246 DOCK7Q96N67 2140 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 PNMA6EA0A0J9YXQ4 647 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ANO9A1A5B4 782 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 DPPA5A6NC42 116 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 LACTBL1A8MY62 500 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 H0YGN5 161 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 M0QYT0 321 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 RHODO00212 210 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 KIF3BO15066 747 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 NKX2-8O15522 239 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 RPP40O75818 363 aaKnown RBP1.64□□□□□ -2.15
UBXN4-207ENST00000471246 FGF18O76093 207 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 KAT7O95251 611 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 SGPL1O95470 568 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 GLP2RO95838 553 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ALDOAP04075 364 aaKnown RBP1.64□□□□□ -2.15
UBXN4-207ENST00000471246 CHRNB1P11230 501 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 TGM2P21980 687 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 KLRK1P26718 216 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 AKT1P31749 480 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 CIITAP33076 1130 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 GNALP38405 381 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 HSPA7P48741 367 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 P2RX3P56373 397 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 FAM3BP58499 235 aaPredicted RBP1.64□□□□□ -2.15
UBXN4-207ENST00000471246 GAD2Q05329 585 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ERV3-1Q14264 604 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 GRM4Q14833 912 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 PTGR1Q14914 329 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 RAB30Q15771 203 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 AAK1Q2M2I8 961 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 DGKKQ5KSL6 1271 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 PIK3CD-AS1Q5SR53 167 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 IZUMO3Q5VZ72 239 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ANKRD40Q6AI12 368 aa1.64□□□□□ -2.15
UBXN4-207ENST00000471246 ISM2Q6H9L7 571 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms