RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 UBAP2Q5T6F2 1119 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 LVRNQ6Q4G3 990 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 BBS12Q6ZW61 710 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 NT5DC4Q86YG4 428 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 GLMNQ92990 594 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 ATXN7L3BQ96GX2 97 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 ZFP42Q96MM3 310 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 CLDN5O00501 218 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 HCRTO43612 131 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 POMCP01189 267 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 DARSP14868 501 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 AMPD1P23109 780 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 PTP4A2Q12974 167 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 PDK2Q15119 407 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 LPPQ93052 612 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 PGBD4Q96DM1 585 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 ZFYVE19Q96K21 471 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 PAFAH2Q99487 392 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 SNRNP25Q9BV90 132 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 CDHR5Q9HBB8 845 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 TRIM39Q9HCM9 518 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 DDX43Q9NXZ2 648 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 DNAJC25-GNG10A0A024R161 153 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 OCM2P0CE71 109 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 OCMP0CE72 109 aaPredicted RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 PPIDQ08752 370 aaKnown RBP16.98■□□□□ 0.31
HOXB3-205ENST00000470495 TCEAL1Q15170 157 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 WSCD1Q658N2 575 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 DENND5BQ6ZUT9 1274 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 POLNQ7Z5Q5 900 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 DEFB106AQ8N104 65 aa16.98■□□□□ 0.31
HOXB3-205ENST00000470495 IGKV6-21A0A0C4DH24 114 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 GUCY1B2O75343 617 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 TPI1P60174 286 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 WDTC1Q8N5D0 677 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 PRPF18Q99633 342 aaKnown RBP16.97■□□□□ 0.31
HOXB3-205ENST00000470495 STMN1P16949 149 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 SNX17Q15036 470 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 SMUG1Q53HV7 270 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 DDIT4Q9NX09 232 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 DRG1Q9Y295 367 aaKnown RBP16.97■□□□□ 0.31
HOXB3-205ENST00000470495 SMIM28A0A1B0GU29 152 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 EEF2KO00418 725 aaKnown RBP16.97■□□□□ 0.31
HOXB3-205ENST00000470495 THP07101 528 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 LINGO3P0C6S8 592 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 GHRP10912 638 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 NAA20P61599 178 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 DPYSL3Q14195 570 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 TRIM16LQ309B1 348 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 RNF139Q8WU17 664 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 MAML1Q92585 1016 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 C16orf70Q9BSU1 422 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 TRPC7Q9HCX4 862 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 EMC3Q9P0I2 261 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 CACNG4Q9UBN1 327 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
HOXB3-205ENST00000470495 ZBTB42B2RXF5 422 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 ACSL4O60488 711 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 TKTL1P51854 596 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 C9orf57Q5W0N0 161 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 SHQ1Q6PI26 577 aaKnown RBP16.97■□□□□ 0.31
HOXB3-205ENST00000470495 LCLAT1Q6UWP7 414 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 TRPM8Q7Z2W7 1104 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 GIPC3Q8TF64 312 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 LRRC4CQ9HCJ2 640 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 SENP1Q9P0U3 644 aa16.97■□□□□ 0.31
HOXB3-205ENST00000470495 GOLGA8QA0A0J9YX86 632 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 GOLGA8OA6NCC3 632 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 GOLGA8NF8WBI6 632 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 ITGAVP06756 1048 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 GPD2P43304 727 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 GDF10P55107 478 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 EDEM1Q92611 657 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 PLEKHA5Q9HAU0 1116 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SLC38A7Q9NVC3 462 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
HOXB3-205ENST00000470495 COL1A2P08123 1366 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 E2F8A0AVK6 867 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 CFAP69A5D8W1 941 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 KITP10721 976 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 NQO1P15559 274 aaKnown RBP16.96■□□□□ 0.31
HOXB3-205ENST00000470495 TMPRSS15P98073 1019 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SIX1Q15475 284 aaPredicted RBP16.96■□□□□ 0.31
HOXB3-205ENST00000470495 GRAMD1BQ3KR37 738 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 DQX1Q8TE96 717 aaKnown RBP16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SCG3Q8WXD2 468 aaKnown RBP16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 TRIM33Q9UPN9 1127 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 PTGS2P35354 604 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 ZNF132P52740 706 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 IST1P53990 364 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 NR1D2Q14995 579 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 ARHGAP24Q8N264 748 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 SCAIQ8N9R8 606 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 CCDC28BQ9BUN5 200 aa16.96■□□□□ 0.31
HOXB3-205ENST00000470495 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms