RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SH3BP1Q9Y3L3 701 aa11.64□□□□□ -0.55
SREBF1-209ENST00000470247 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF487B1APH4 448 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF185O15231 689 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 SRGAP2O75044 1071 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 GOT1P17174 413 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 AMPD1P23109 780 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 PTPN7P35236 360 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 SLC11A2P49281 568 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 SGSHP51688 502 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 DPYSQ14117 519 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 LLGL1Q15334 1064 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 PPP6R3Q5H9R7 873 aaPredicted RBP11.63□□□□□ -0.55
SREBF1-209ENST00000470247 RFWD3Q6PCD5 774 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 VITQ6UXI7 678 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 SPOCD1Q6ZMY3 1216 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 OTOP3Q7RTS5 596 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZDHHC14Q8IZN3 488 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ADGRG2Q8IZP9 1017 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 CPXM2Q8N436 756 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 PQLC3Q8N755 202 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 KCTD6Q8NC69 237 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 PCDH19Q8TAB3 1148 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 BPIFB1Q8TDL5 484 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ASIC4Q96FT7 647 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 CSPG4P5Q96PW8 444 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 RNF157Q96PX1 679 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 PHF7Q9BWX1 381 aaPredicted RBP11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZFP14Q9HCL3 533 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF212Q9UDV6 495 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 VANGL2Q9ULK5 521 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF510Q9Y2H8 683 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 EYSQ5T1H1 3165 aa11.63□□□□□ -0.55
SREBF1-209ENST00000470247 HELZP42694 1942 aaKnown RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 NUP210Q8TEM1 1887 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 hCG_1818297A0A087WSY0 165 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 TCRBV7S2A1N4TA0A589 114 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 E9PAM4 449 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 DCLK1O15075 740 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 CREB3O43889 395 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ECI2O75521 394 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 KRT10P13645 584 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 IL9P15248 144 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 SP100P23497 879 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 COPS2P61201 443 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 RPS24P62847 133 aaKnown RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 FCHO2Q0JRZ9 810 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 HTR4Q13639 388 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ALFQ53S48 1182 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ANKRD20A8PQ5CZ79 823 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ACBD5Q5T8D3 534 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 PTCRAQ6ISU1 281 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 NLRP14Q86W24 1093 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 LGI2Q8N0V4 545 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ELSPBP1Q96BH3 223 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 MS4A14Q96JA4 679 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 PBKQ96KB5 322 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 PRICKLE1Q96MT3 831 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 FAM83CQ9BQN1 747 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 OSBPL8Q9BZF1 889 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 KLC2Q9H0B6 622 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ARHGEF4Q9NR80 690 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 ETNK2Q9NVF9 386 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 MPP6Q9NZW5 540 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 RCOR3Q9P2K3 495 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 LSM7Q9UK45 103 aaKnown RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-209ENST00000470247 EFR3BQ9Y2G0 817 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 SAR1BQ9Y6B6 198 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
SREBF1-209ENST00000470247 WASH4PA8MWX3 477 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 H3BRJ5 948 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 PDE2AO00408 941 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 EEF2KO00418 725 aaKnown RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 CES2O00748 559 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 CNTN5O94779 1100 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 TCP1P17987 556 aaKnown RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 ZNF135P52742 658 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 KRT81Q14533 505 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 SIX1Q15475 284 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-209ENST00000470247 EML3Q32P44 896 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 ZFYVE27Q5T4F4 411 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 SLC9A4Q6AI14 798 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 RHBDF2Q6PJF5 856 aa11.61□□□□□ -0.55
SREBF1-209ENST00000470247 RFX8Q6ZV50 586 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms