RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KIF11P52732 1056 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 NFKB2Q00653 900 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 OVGP1Q12889 678 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 UBAP2LQ14157 1087 aaKnown RBP12.53□□□□□ -0.4
LSM2-209ENST00000470083 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 SGO2Q562F6 1265 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 NAPEPLDQ6IQ20 393 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 KIAA0907Q7Z7F0 614 aaPredicted RBP12.53□□□□□ -0.4
LSM2-209ENST00000470083 IQCHQ86VS3 1027 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 ZC3H3Q8IXZ2 948 aaKnown RBP12.53□□□□□ -0.4
LSM2-209ENST00000470083 OR4C6Q8NH72 309 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 JAKMIP2Q96AA8 810 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 MID1O15344 667 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 LATO43561 262 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 MAGEC1O60732 1142 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 RNASEH1O60930 286 aaKnown RBP12.52□□□□□ -0.41
LSM2-209ENST00000470083 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
LSM2-209ENST00000470083 BMP15O95972 392 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 GP1BAP07359 652 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
LSM2-209ENST00000470083 IDEP14735 1019 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 ITGB6P18564 788 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 CYP24A1Q07973 514 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 EFEMP1Q12805 493 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 SERINC3Q13530 473 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 CST6Q15828 149 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 LINC00303Q3SY05 128 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 MBLAC2Q68D91 279 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 SLC25A45Q8N413 288 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 C12orf29Q8N999 325 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.41
LSM2-209ENST00000470083 SDCBP2Q9H190 292 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 SEPT3Q9UH03 358 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 SATB2Q9UPW6 733 aa12.52□□□□□ -0.41
LSM2-209ENST00000470083 PLXNA2O75051 1894 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 A0A1W2PNU3 283 aaPredicted RBP12.51□□□□□ -0.41
LSM2-209ENST00000470083 CDRT15L2A8MXV6 281 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 CR2P20023 1033 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 ADORA2BP29275 332 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 ADPRHP54922 357 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 ZNF445P59923 1031 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 CLN3Q13286 438 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 ISXQ2M1V0 245 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
LSM2-209ENST00000470083 ZNF667Q5HYK9 610 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 C3orf38Q5JPI3 329 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 RDH13Q8NBN7 331 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
LSM2-209ENST00000470083 OMDQ99983 421 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 MTG2Q9H4K7 406 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 MARCH2Q9P0N8 246 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 STRIP2Q9ULQ0 834 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 PCDHGA8Q9Y5G5 932 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
LSM2-209ENST00000470083 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 SLC12A8A0AV02 714 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 PHACTR2O75167 634 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 SIN3BO75182 1162 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 CLSTN1O94985 981 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 ITGB2P05107 769 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 SFTPCP11686 197 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 MYF5P13349 255 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 POLR2EP19388 210 aaKnown RBP12.5□□□□□ -0.41
LSM2-209ENST00000470083 DGKAP23743 735 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 NDST1P52848 882 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 PPP2CBP62714 309 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 PPP2CAP67775 309 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 EHHADHQ08426 723 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 ZSCAN23Q3MJ62 389 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 UNC93AQ86WB7 457 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 MMAAQ8IVH4 418 aaKnown RBP12.5□□□□□ -0.41
LSM2-209ENST00000470083 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 PLD4Q96BZ4 506 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 MYO19Q96H55 970 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
LSM2-209ENST00000470083 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms