RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CEP295NLQ96MC4 621 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
SMC4-211ENST00000469858 CCSER2Q9H7U1 834 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 LRRC4CQ9HCJ2 640 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 NEU3Q9UQ49 428 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 HS3ST4Q9Y661 456 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 MYO18AQ92614 2054 aaKnown RBP18.69■□□□□ 0.58
SMC4-211ENST00000469858 GOLGA6CA6NDK9 693 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 TLR5O60602 858 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 ZDHHC11BP0C7U3 371 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 GOLGA6DP0CG33 693 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 SLC2A3P11169 496 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 SERPINB6P35237 376 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 MAGEA4P43358 317 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 RAB33AQ14088 237 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 KRT71Q3SY84 523 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 HP1BP3Q5SSJ5 553 aaPredicted RBP18.68■□□□□ 0.58
SMC4-211ENST00000469858 TMEM240Q5SV17 173 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 CENPUQ71F23 418 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 RELL1Q8IUW5 271 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 KLC2Q9H0B6 622 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 TMBIM4Q9HC24 238 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 GOLGA6AQ9NYA3 693 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 SEPT10Q9P0V9 454 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 HSFX1Q9UBD0 423 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 SLC12A8A0AV02 714 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 C5orf60A6NFR6 353 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 PRRG1O14668 218 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 GCATO75600 419 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 APOEP02649 317 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 HMBSP08397 361 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 ALDH1A3P47895 512 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 KCNJ11Q14654 390 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 FASTKD3Q14CZ7 662 aaKnown RBP18.68■□□□□ 0.58
SMC4-211ENST00000469858 TRIP4Q15650 581 aaPredicted RBP18.68■□□□□ 0.58
SMC4-211ENST00000469858 TBC1D31Q96DN5 1066 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 P2RY11Q96G91 374 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 ZNF512Q96ME7 567 aaPredicted RBP18.68■□□□□ 0.58
SMC4-211ENST00000469858 TMEM51Q9NW97 253 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 INSL6Q9Y581 213 aa18.68■□□□□ 0.58
SMC4-211ENST00000469858 SMAPO00193 183 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 LINC00271P0C7V0 271 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 CSH1P0DML2 217 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 CSH2P0DML3 217 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 SYN1P17600 705 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 ARL4CP56559 192 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 PDIA2Q13087 525 aaKnown RBP18.67■□□□□ 0.58
SMC4-211ENST00000469858 MTM1Q13496 603 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 PIK3R6Q5UE93 754 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 MANEALQ5VSG8 457 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
SMC4-211ENST00000469858 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 ZBED8Q8IZ13 594 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 FERMT1Q9BQL6 677 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 ETNK1Q9HBU6 452 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 RAD54BQ9Y620 910 aa18.67■□□□□ 0.58
SMC4-211ENST00000469858 LAMA2P24043 3122 aaKnown RBP18.66■□□□□ 0.58
SMC4-211ENST00000469858 A0A0A0MRY4 1105 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 E9PAM4 449 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 RNF103O00237 685 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 CHADO15335 359 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 TEX28O15482 410 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 BANF1O75531 89 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 STK10O94804 968 aaKnown RBP18.66■□□□□ 0.58
SMC4-211ENST00000469858 HMGA1P17096 107 aaKnown RBP18.66■□□□□ 0.58
SMC4-211ENST00000469858 ELF1P32519 619 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 TAF12Q16514 161 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 ANKRD20A2Q5SQ80 823 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 FNBP1LQ5T0N5 605 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 ANKRD20A1Q5TYW2 823 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 ANKRD20A3Q5VUR7 823 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 C4orf22Q6V702 233 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 C14orf80Q86SX3 495 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 SH2D3CQ8N5H7 860 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 PDZD8Q8NEN9 1154 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 CELF6Q96J87 481 aaKnown RBP18.66■□□□□ 0.58
SMC4-211ENST00000469858 ATP6V1G3Q96LB4 118 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 SPATA13Q96N96 652 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 CEP41Q9BYV8 373 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 ZBP1Q9H171 429 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 CATSPERBQ9H7T0 1116 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 SMIM23A6NLE4 172 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 NCAM2O15394 837 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 METTL18O95568 372 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 APRTP07741 180 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 HOXC13P31276 330 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 HTR7P34969 479 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 TUBP50607 506 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 PLD1Q13393 1074 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 ATP6V0D2Q8N8Y2 350 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 DEPDC1BQ8WUY9 529 aa18.66■□□□□ 0.58
SMC4-211ENST00000469858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMC4-211ENST00000469858 BCCIPQ9P287 314 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMC4-211ENST00000469858 DOCK4Q8N1I0 1966 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 FGF10O15520 208 aaPredicted RBP18.65■□□□□ 0.58
SMC4-211ENST00000469858 MX2P20592 715 aa18.65■□□□□ 0.58
SMC4-211ENST00000469858 MLLT6P55198 1093 aaPredicted RBP18.65■□□□□ 0.58
SMC4-211ENST00000469858 GALNT2Q10471 571 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms