RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IRGQQ8WZA9 623 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KCNN1Q92952 543 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 DGCR14Q96DF8 476 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 HIC2Q96JB3 615 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 NLRP4Q96MN2 994 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 FAM213AQ9BRX8 229 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 EPHX3Q9H6B9 360 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 MUC3AQ02505 3323 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 C5orf67F2Z3F1 127 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TRDMT1O14717 391 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 CASQ2O14958 399 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 GPR37L1O60883 481 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KLHL2O95198 593 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KRT7P08729 469 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 CTSHP09668 335 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 VAV1P15498 845 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 VCLP18206 1134 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ELK3P41970 407 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ZNF132P52740 706 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TTC3P53804 2025 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 GDF10P55107 478 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TMPRSS15P98073 1019 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 BTKQ06187 659 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KBTBD12Q3ZCT8 623 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TEX44Q53QW1 395 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 CFAP157Q5JU67 520 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TDRD10Q5VZ19 366 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 DNAJC24Q6P3W2 148 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 PGM2L1Q6PCE3 622 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM270Q6UE05 265 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ARCQ7LC44 396 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 SPATA24Q86W54 205 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ARID3BQ8IVW6 561 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 RDM1Q8NG50 284 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ZNF606Q8WXB4 792 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 ELMO3Q96BJ8 720 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 HAUS1Q96CS2 278 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 YME1L1Q96TA2 773 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 LMAN2LQ9H0V9 348 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 PTTG2Q9NZH5 202 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 RAPGEFL1Q9UHV5 662 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TELO2Q9Y4R8 837 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 STYXL1Q9Y6J8 313 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KIAA1671Q9BY89 1806 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 SDR42E2A6NKP2 422 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 MAFGO15525 162 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 VNN1O95497 513 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 CHRNA1P02708 482 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 C1QAP02745 245 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 ASLP04424 464 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 RB1P06400 928 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 PRKCHP24723 683 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 CDH5P33151 784 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 TCF7P36402 384 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 AQP5P55064 265 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 OGDHQ02218 1023 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 KDSRQ06136 332 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 DPYSL3Q14195 570 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 UGCGQ16739 394 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 TXNRD3NBQ6F5E7 133 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 DCUN1D2Q6PH85 259 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 CDHR3Q6ZTQ4 885 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 RAPH1Q70E73 1250 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 UBR7Q8N806 425 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 KLHL23Q8NBE8 558 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM35BQ8NCS4 154 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 SEPT1Q8WYJ6 367 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 CLPTM1LQ96KA5 538 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 ACAP3Q96P50 834 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 MCEEQ96PE7 176 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 DHX33Q9H6R0 707 aaKnown RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 APOBEC3GQ9HC16 384 aaKnown RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 ERAP1Q9NZ08 941 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 ITGA11Q9UKX5 1188 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 RWDD3Q9Y3V2 267 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 HBS1LQ9Y450 684 aaKnown RBP9.87□□□□□ -0.83
HDAC3-205ENST00000469550 SQORQ9Y6N5 450 aa9.87□□□□□ -0.83
HDAC3-205ENST00000469550 TCRBV7S3A2A0A539 114 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 PRR5-ARHGAP8B1AHC4 643 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 WDR64B1ANS9 1081 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 TRIM49D1C9J1S8 452 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 HNRNPDLO14979 420 aaKnown RBP9.86□□□□□ -0.83
HDAC3-205ENST00000469550 CHADO15335 359 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 CST8O60676 142 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 OPHN1O60890 802 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 PIAS1O75925 651 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 TMCC1O94876 653 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 WEE2P0C1S8 567 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 IMPDH2P12268 514 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 MYL4P12829 197 aa9.86□□□□□ -0.83
HDAC3-205ENST00000469550 TNNI1P19237 187 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms