RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 USP4Q13107 963 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF211Q13398 564 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TFDP2Q14188 446 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 FAM133BQ5BKY9 247 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ANKRD20A8PQ5CZ79 823 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 MS4A13Q5J8X5 152 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SEL1L2Q5TEA6 688 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PIK3R6Q5UE93 754 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 AFMIDQ63HM1 303 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TXNDC8Q6A555 127 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 NADSYN1Q6IA69 706 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SCYL2Q6P3W7 929 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PDZD4Q76G19 769 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 GRASPQ7Z6J2 395 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CMTM8Q8IZV2 173 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PYROXD2Q8N2H3 581 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CPXM2Q8N436 756 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 MMGT1Q8N4V1 131 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PLD5Q8N7P1 536 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ATP6V0D2Q8N8Y2 350 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 KCTD6Q8NC69 237 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 MNS1Q8NEH6 495 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SPATA4Q8NEY3 305 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SLC35B2Q8TB61 432 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SUSD6Q92537 303 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SMG7Q92540 1137 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SLCO2A1Q92959 643 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 NKD2Q969F2 451 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 WBP2Q969T9 261 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ACSF2Q96CM8 615 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PABPC5Q96DU9 382 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 GCNAQ96QF7 691 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PSMB7Q99436 277 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 DCLK3Q9C098 648 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 KLC2Q9H0B6 622 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 LRRC19Q9H756 370 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ARHGEF4Q9NR80 690 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 GPATCH2LQ9NWQ4 482 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 RASAL2Q9UJF2 1139 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 HS3ST4Q9Y661 456 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CDH23Q9H251 3354 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 H3BRJ5 948 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ACSL4O60488 711 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TBX10O75333 385 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 LRIG2O94898 1065 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TJP3O95049 919 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 APOEP02649 317 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SRGAP2BP0DMP2 458 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 MYL4P12829 197 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TGM2P21980 687 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PAFAH1B1P43034 410 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 KCNQ1P51787 676 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TUBB4BP68371 445 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 NTHL1P78549 312 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CYP4F8P98187 520 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TEAD2Q15562 447 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF77Q15935 545 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CCNG2Q16589 344 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 NLRP14Q86W24 1093 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 DDX42Q86XP3 938 aaKnown RBP eCLIP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 C12orf76Q8N812 135 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ARL14EPQ8N8R7 260 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 HSPH1Q92598 858 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 OLFM3Q96PB7 478 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CYP2S1Q96SQ9 504 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 DHX35Q9H5Z1 703 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 OBP2AQ9NY56 170 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 GDE1Q9NZC3 331 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 OR12D3Q9UGF7 316 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SLC12A6Q9UHW9 1150 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 XPO7Q9UIA9 1087 aaKnown RBP8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF510Q9Y2H8 683 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 RAD54BQ9Y620 910 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 DOCK4Q8N1I0 1966 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 E2F8A0AVK6 867 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 APOC4-APOC2K7ER74 178 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 FGF10O15520 208 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 APOC2P02655 101 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 KRT10P13645 584 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 ZFXP17010 805 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 GOT1P17174 413 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 CEBPBP17676 345 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 SSR1P43307 286 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 NR2C2P49116 596 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 FNTAP49354 379 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 HARS2P49590 506 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 DLX2Q07687 328 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 AUHQ13825 339 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 NOMO1Q15155 1222 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 OASLQ15646 514 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 ARHGAP15Q53QZ3 475 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
NPHP3-204ENST00000469232 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
NPHP3-204ENST00000469232 ADGRF1Q5T601 910 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms