RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
NUP50-214ENST00000469163 KCTD5Q9NXV2 234 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 SNTG2Q9NY99 539 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 RNF14Q9UBS8 474 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 RSL24D1Q9UHA3 163 aaKnown RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 VANGL2Q9ULK5 521 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 PRG3Q9Y2Y8 225 aaPredicted RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 PCDHA13Q9Y5I0 950 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 MYOCOSA0A1B0GUC4 107 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 FOXN3O00409 490 aaPredicted RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 CCDC22O60826 627 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 AGTP01019 485 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 UQCRBP14927 111 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 UCHL3P15374 230 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 RPL17P18621 184 aaKnown RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 ECHS1P30084 290 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 HAAOP46952 286 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 FMO5P49326 533 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 NUP107P57740 925 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 ITGADQ13349 1161 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 MTM1Q13496 603 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 SNAP47Q5SQN1 464 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 PPP4R4Q6NUP7 873 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 ERI1Q8IV48 349 aaKnown RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 CLIP4Q8N3C7 705 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 ACSF2Q96CM8 615 aaPredicted RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 MIPEPQ99797 713 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 INTS2Q9H0H0 1204 aaKnown RBP10.21□□□□□ -0.77
NUP50-214ENST00000469163 RUBCNLQ9H714 662 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 SP140LQ9H930 580 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 ANLNQ9NQW6 1124 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 AMACRQ9UHK6 382 aa10.21□□□□□ -0.77
NUP50-214ENST00000469163 DLEC1Q9Y238 1755 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 TRIM64A6NGJ6 449 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 TRIM64BA6NI03 449 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 J3QRK9 145 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 C2CD2LO14523 706 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 ZC3H11AO75152 810 aaKnown RBP eCLIP10.21□□□□□ -0.78
NUP50-214ENST00000469163 ALAS2P22557 587 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 PBX3P40426 434 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 FOLH1Q04609 750 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 TFDP1Q14186 410 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 CDO1Q16878 200 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 GRAMD1BQ3KR37 738 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 PPP6R3Q5H9R7 873 aaPredicted RBP10.21□□□□□ -0.78
NUP50-214ENST00000469163 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 NT5DC1Q5TFE4 455 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 PXDC1Q5TGL8 231 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 CDKAL1Q5VV42 579 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 RAPH1Q70E73 1250 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 TMEM161BQ8NDZ6 487 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 OR5B17Q8NGF7 314 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 TRIB2Q92519 343 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 FBXL8Q96CD0 374 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 ZFP42Q96MM3 310 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 PCYT2Q99447 389 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 ZNHIT2Q9UHR6 403 aa10.21□□□□□ -0.78
NUP50-214ENST00000469163 MYH11P35749 1972 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ZBBXA8MT70 800 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 PDXKO00764 312 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 T-ENOLP0DO92 83 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 SLC29A2Q14542 456 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 OR6B3Q8NGW1 331 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 RFWD2Q8NHY2 731 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SLC20A1Q8WUM9 679 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 PGM2Q96G03 612 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 NT5C1BQ96P26 610 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 POLHQ9Y253 713 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 LRRC72A6NJI9 287 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 KCNK3O14649 394 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 RASGRF2O14827 1237 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 HBP1O60381 514 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SIN3BO75182 1162 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SPAG7O75391 227 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 MYO1DO94832 1006 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SEMA3DO95025 777 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ESRRBO95718 433 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ITGB3P05106 788 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 CRABP2P29373 138 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 RGS7P49802 495 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 CDK18Q07002 472 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ELMSAN1Q6PJG2 1045 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 LRRC55Q6ZSA7 311 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 TMCO2Q7Z6W1 182 aaPredicted RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 CCDC33Q8N5R6 958 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ZFRQ96KR1 1074 aaKnown RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 FBXL18Q96ME1 805 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 MRPL4Q9BYD3 311 aaKnown RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 FAM237AA0A1B0GTK4 181 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 PLA2G6O60733 806 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 CIB2O75838 187 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ASGR1P07306 291 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SMIM10L2AP0DMW4 78 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SMIM10L2BP0DMW5 78 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 RAP1GDS1P52306 607 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms