RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 HMGB4Q8WW32 186 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 ZFPM2Q8WW38 1151 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 SCNM1Q9BWG6 230 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 TRIM2Q9C040 744 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 PRDM16Q9HAZ2 1276 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 TMEM184CQ9NVA4 438 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 TRNAU1APQ9NX07 287 aaKnown RBP6.08□□□□□ -1.44
XRN1-207ENST00000468894 TUBA8Q9NY65 449 aaPredicted RBP6.08□□□□□ -1.44
XRN1-207ENST00000468894 PI4KBQ9UBF8 816 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
XRN1-207ENST00000468894 EMSYQ7Z589 1322 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 LARGE1O95461 756 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 ENO1P06733 434 aaKnown RBP6.07□□□□□ -1.44
XRN1-207ENST00000468894 CYP3A4P08684 503 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 GRK5P34947 590 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 MMP13P45452 471 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 AP2B1P63010 937 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 ID2Q02363 134 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 FOXO1Q12778 655 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 EARS2Q5JPH6 523 aaKnown RBP6.07□□□□□ -1.44
XRN1-207ENST00000468894 FAM83BQ5T0W9 1011 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 C10orf25Q5T742 122 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 TTC22Q5TAA0 569 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 ATPAF1Q5TC12 328 aaPredicted RBP6.07□□□□□ -1.44
XRN1-207ENST00000468894 TANGO2Q6ICL3 276 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 KLHL17Q6TDP4 642 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 RAB11FIP2Q7L804 512 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 UBE2Q1Q7Z7E8 422 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 SRFBP1Q8NEF9 429 aaKnown RBP6.07□□□□□ -1.44
XRN1-207ENST00000468894 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 ARPC5LQ9BPX5 153 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 MOV10Q9HCE1 1003 aaKnown RBP6.07□□□□□ -1.44
XRN1-207ENST00000468894 SLC12A4Q9UP95 1085 aa6.07□□□□□ -1.44
XRN1-207ENST00000468894 C3orf70A6NLC5 250 aaPredicted RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 TLR2O60603 784 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 CNOT3O75175 753 aaKnown RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 CYP19A1P11511 503 aaPredicted RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 AKR1A1P14550 325 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 TFEBP19484 476 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 CHKAP35790 457 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 SLC12A2P55011 1212 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 RBM6P78332 1123 aaKnown RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 SHC2P98077 582 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 RNASELQ05823 741 aaKnown RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 STIM1Q13586 685 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 SHC4Q6S5L8 630 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 EXD3Q8N9H8 876 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 CLEC4CQ8WTT0 213 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 SMG7Q92540 1137 aaKnown RBP6.06□□□□□ -1.44
XRN1-207ENST00000468894 ABHD14AQ9BUJ0 271 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 PTPRHQ9HD43 1115 aa6.06□□□□□ -1.44
XRN1-207ENST00000468894 CYP3A7-CYP3A51PA0A087WV96 503 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 MBD3L5A6NJ08 208 aaPredicted RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 MOSPD3O75425 235 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 HEXIM1O94992 359 aaKnown RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 SGPL1O95470 568 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 CYP3A7P24462 503 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 CPA2P48052 419 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 CDK7P50613 346 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 POLE2P56282 527 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 PGM5Q15124 567 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 ZNF569Q5MCW4 686 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 ZNF793Q6ZN11 406 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 PIP4P1Q86T03 277 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 OR52N4Q8NGI2 321 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 C16orf52Q8NHV5 167 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 OTUD7AQ8TE49 926 aaPredicted RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 ZNF347Q96SE7 839 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 ELAC1Q9H777 363 aaKnown RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 ERVK-5Q9HDB9 667 aa6.05□□□□□ -1.44
XRN1-207ENST00000468894 LIN7CQ9NUP9 197 aaKnown RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 C19orf53Q9UNZ5 99 aaPredicted RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 SETD1BQ9UPS6 1966 aaKnown RBP6.05□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3DA0A087WVF3 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3IA0A087WXS9 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3EA0A087X179 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3KA0A087X1G2 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3BA6NDS4 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3FA6NER0 549 aaPredicted RBP6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3LB9A6J9 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 PPEF2O14830 753 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 USP12O75317 370 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 CYP21A2P08686 494 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 CD63P08962 238 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 ALDOCP09972 364 aaKnown RBP6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3HP0C7X1 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TGM2P21980 687 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 B4GALNT1Q00973 533 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 SRSF1Q07955 248 aaKnown RBP eCLIP6.04□□□□□ -1.44
XRN1-207ENST00000468894 RABEP1Q15276 862 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 GALNTL6Q49A17 601 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3GQ6DHY5 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3CQ6IPX1 549 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 JMJD6Q6NYC1 403 aaPredicted RBP6.04□□□□□ -1.44
XRN1-207ENST00000468894 ERAP2Q6P179 960 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 RTL10Q7L3V2 364 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 ANKRD13BQ86YJ7 626 aa6.04□□□□□ -1.44
XRN1-207ENST00000468894 TBC1D3Q8IZP1 549 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms