RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TUBP50607 506 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MLLT6P55198 1093 aaPredicted RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 TBX4P57082 545 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MAGOHP61326 146 aaKnown RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 PITX1P78337 314 aaPredicted RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 DSG1Q02413 1049 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 SLC10A2Q12908 348 aaPredicted RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 PLD1Q13393 1074 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 PRPSAP1Q14558 356 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 PSMD5Q16401 504 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ANO4Q32M45 955 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MGAT5BQ3V5L5 792 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ANKRD20A2Q5SQ80 823 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 LGSNQ5TDP6 509 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ANKRD20A1Q5TYW2 823 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MANEALQ5VSG8 457 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ANKRD20A3Q5VUR7 823 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 KCTD16Q68DU8 428 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 DEFB128Q7Z7B8 93 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 DDX53Q86TM3 631 aaKnown RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 SLC39A11Q8N1S5 342 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 OR2W6PQ8NHA6 318 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 AZIN2Q96A70 460 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 P2RY11Q96G91 374 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 CYTH2Q99418 400 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 RHOBTB2Q9BYZ6 727 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 PRDM12Q9H4Q4 367 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 VPS37BQ9H9H4 285 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 LRRC4CQ9HCJ2 640 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSH5-213ENST00000468136 SPG21Q9NZD8 308 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 UXTQ9UBK9 157 aaPredicted RBP10.49□□□□□ -0.73
MSH5-213ENST00000468136 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 TLDC2A0PJX2 215 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 F8W810 466 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 TMEM63AO94886 807 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 C1RP00736 705 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 SHBGP04278 402 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 URODP06132 367 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 RHOQP17081 205 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 GARSP41250 739 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 MAGEA3P43357 314 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 NDST2P52849 883 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 GEMIN4P57678 1058 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 AP1B1Q10567 949 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 IFRD2Q12894 506 aaPredicted RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 PPIGQ13427 754 aaKnown RBP eCLIP10.48□□□□□ -0.731e-7■■■■□ 20
MSH5-213ENST00000468136 NAB1Q13506 487 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 VEPH1Q14D04 833 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 DDR2Q16832 855 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 SPOUT1Q5T280 376 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 C3orf62Q6ZUJ4 267 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 RTL10Q7L3V2 364 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 PYROXD2Q8N2H3 581 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 RTL3Q8N8U3 475 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 ATAD1Q8NBU5 361 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 CCNYQ8ND76 341 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 ALKBH8Q96BT7 664 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 C9orf72Q96LT7 481 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 MYRFLQ96LU7 910 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 DDX50Q9BQ39 737 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 ACSS3Q9H6R3 686 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 RC3H2Q9HBD1 1191 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 SSU72Q9NP77 194 aaKnown RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 PSMC3IPQ9P2W1 217 aaPredicted RBP10.48□□□□□ -0.73
MSH5-213ENST00000468136 ASB3Q9Y575 518 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 TEX264Q9Y6I9 313 aa10.48□□□□□ -0.73
MSH5-213ENST00000468136 PLXNA3P51805 1871 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 FNDC1Q4ZHG4 1894 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 MAGEB16A2A368 324 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 RNF103O00237 685 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 PAGE1O75459 146 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 FAM155BO75949 473 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 SUN1O94901 812 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 ABLIM3O94929 683 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IGLV3-27P01718 113 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 APRTP07741 180 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 SRGAP2BP0DMP2 458 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 PFKLP17858 780 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IFNAR2P48551 515 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 GATMP50440 423 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IRAK1P51617 712 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 GNGT1P63211 74 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 IFI35P80217 286 aaPredicted RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 ILF2Q12905 390 aaKnown RBP10.47□□□□□ -0.73
MSH5-213ENST00000468136 TAF10Q12962 218 aa10.47□□□□□ -0.73
MSH5-213ENST00000468136 DUSP4Q13115 394 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms