RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TOR4AQ9NXH8 423 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 TAB2Q9NYJ8 693 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 EIF2B4Q9UI10 523 aaKnown RBP16.44■□□□□ 0.22
TSSC4-208ENST00000467308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSSC4-208ENST00000467308 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 HLA-DRAP01903 254 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 CYBBP04839 570 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 C7P10643 843 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 CORO1AP31146 461 aaKnown RBP16.43■□□□□ 0.22
TSSC4-208ENST00000467308 GTF2H1P32780 548 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 PBX1P40424 430 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 AFF3P51826 1226 aaKnown RBP16.43■□□□□ 0.22
TSSC4-208ENST00000467308 DUSP16Q9BY84 665 aa16.43■□□□□ 0.22
TSSC4-208ENST00000467308 AGO1Q9UL18 857 aaKnown RBP16.43■□□□□ 0.22
TSSC4-208ENST00000467308 KNTC1P50748 2209 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 GTPBP10A4D1E9 387 aaKnown RBP16.42■□□□□ 0.22
TSSC4-208ENST00000467308 STX10O60499 249 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 PRKCHP24723 683 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 VAMP7P51809 220 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 SUZ12Q15022 739 aaKnown RBP16.42■□□□□ 0.22
TSSC4-208ENST00000467308 C1orf220Q5T0J3 134 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 FAM217AQ8IXS0 508 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 ARHGAP18Q8N392 663 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 GALNT15Q8N3T1 639 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 RHBDD1Q8TEB9 315 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 ERGIC2Q96RQ1 377 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 VPS16Q9H269 839 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 OSGEPQ9NPF4 335 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 RASAL2Q9UJF2 1139 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 RAXQ9Y2V3 346 aa16.42■□□□□ 0.22
TSSC4-208ENST00000467308 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 P4HA2O15460 535 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
TSSC4-208ENST00000467308 EPHX1P07099 455 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 ATXN1LP0C7T5 689 aaKnown RBP16.41■□□□□ 0.22
TSSC4-208ENST00000467308 EFEMP1Q12805 493 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
TSSC4-208ENST00000467308 FKBP15Q5T1M5 1219 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 DENND1CQ8IV53 801 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 VSTM4Q8IW00 320 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 OR2T3Q8NH03 318 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 PPP1R9BQ96SB3 815 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 APOBEC3GQ9HC16 384 aaKnown RBP16.41■□□□□ 0.22
TSSC4-208ENST00000467308 MARCH2Q9P0N8 246 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 STRIP2Q9ULQ0 834 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 CLEC4EQ9ULY5 219 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 TMEM131Q92545 1883 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
TSSC4-208ENST00000467308 GCN1Q92616 2671 aaKnown RBP16.41■□□□□ 0.22
TSSC4-208ENST00000467308 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 HMBSP08397 361 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 CSNK1EP49674 416 aaKnown RBP16.4■□□□□ 0.22
TSSC4-208ENST00000467308 ARID5AQ03989 594 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 UBXN1Q04323 297 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 PDE4CQ08493 712 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 TEAD4Q15561 434 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
TSSC4-208ENST00000467308 CREBRFQ8IUR6 639 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 DDI1Q8WTU0 396 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
TSSC4-208ENST00000467308 SORCS1Q8WY21 1168 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
TSSC4-208ENST00000467308 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.4■□□□□ 0.22
TSSC4-208ENST00000467308 TEX33O43247 280 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 TNFSF14O43557 240 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 CD58P19256 250 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 GRIA4P48058 902 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 KIF19Q2TAC6 998 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
TSSC4-208ENST00000467308 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 CACUL1Q86Y37 369 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 TAS1R2Q8TE23 839 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 SNX19Q92543 992 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 PLD4Q96BZ4 506 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 FAXDC2Q96IV6 333 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 TMEM245Q9H330 911 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 C6orf106Q9H6K1 298 aaPredicted RBP16.39■□□□□ 0.21
TSSC4-208ENST00000467308 FBRSQ9HAH7 460 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
TSSC4-208ENST00000467308 SLC12A8A0AV02 714 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 PCDHGA12O60330 932 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 HOXD9P28356 352 aaPredicted RBP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 ACSL1P33121 698 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 GRK6P43250 576 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 GCLMP48507 274 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 FMO5P49326 533 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 YWHAGP61981 247 aaKnown RBP eCLIP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 ZBTB16Q05516 673 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 CAMK2BQ13554 666 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 TRIP4Q15650 581 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms