RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 OR4N4Q8N0Y3 316 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 SPICE1Q8N0Z3 855 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 C16orf52Q8NHV5 167 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 POF1BQ8WVV4 589 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 IGFBPL1Q8WX77 278 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 ASB12Q8WXK4 309 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
SMC4-207ENST00000467263 MECRQ9BV79 373 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 GATA5Q9BWX5 397 aaPredicted RBP4.77□□□□□ -1.65
SMC4-207ENST00000467263 TRIM2Q9C040 744 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 TP63Q9H3D4 680 aaPredicted RBP4.77□□□□□ -1.65
SMC4-207ENST00000467263 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 PRDM16Q9HAZ2 1276 aa4.77□□□□□ -1.65
SMC4-207ENST00000467263 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 LY6G6EA0A0G2JKS1 128 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 ENO1P06733 434 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 CD63P08962 238 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 CTSAP10619 480 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 RHBDL3P58872 404 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 RPS13P62277 151 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 HSF1Q00613 529 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 RNASELQ05823 741 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 CHAF1AQ13111 956 aaPredicted RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 PTK2BQ14289 1009 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 ZACNQ401N2 412 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 EARS2Q5JPH6 523 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 MEPCEQ7L2J0 689 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 MYLK4Q86YV6 388 aaPredicted RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 SAMD3Q8N6K7 520 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 REXO5Q96IC2 774 aaKnown RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 VCPIP1Q96JH7 1222 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 LRFN1Q9P244 771 aa4.76□□□□□ -1.65
SMC4-207ENST00000467263 TRPC5Q9UL62 973 aaPredicted RBP4.76□□□□□ -1.65
SMC4-207ENST00000467263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.75□□□□□ -1.65
SMC4-207ENST00000467263 NKX2-8O15522 239 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 PPP6R2O75170 966 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 RFPL3SP0C7P2 107 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 SOX2P48431 317 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 SLC37A1P57057 533 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
SMC4-207ENST00000467263 RPL15P61313 204 aaKnown RBP4.75□□□□□ -1.65
SMC4-207ENST00000467263 ICA1Q05084 483 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 SF3A3Q12874 501 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMC4-207ENST00000467263 TRIM14Q14142 442 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 MRPL10Q7Z7H8 261 aaKnown RBP4.75□□□□□ -1.65
SMC4-207ENST00000467263 ANKRD13BQ86YJ7 626 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 PIGOQ8TEQ8 1089 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 P2RY11Q96G91 374 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 ABHD14AQ9BUJ0 271 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 KATNAL1Q9BW62 490 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 MOV10Q9HCE1 1003 aaKnown RBP4.75□□□□□ -1.65
SMC4-207ENST00000467263 SLC12A4Q9UP95 1085 aa4.75□□□□□ -1.65
SMC4-207ENST00000467263 EMSYQ7Z589 1322 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 MYMKA6NI61 221 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 TLR2O60603 784 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 ITGA2BP08514 1039 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 AKR1A1P14550 325 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 GRK5P34947 590 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 TAS2R50P59544 299 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 NANOS2P60321 138 aaKnown RBP4.74□□□□□ -1.65
SMC4-207ENST00000467263 SHC2P98077 582 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 MORC3Q14149 939 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 GLE1Q53GS7 698 aaKnown RBP4.74□□□□□ -1.65
SMC4-207ENST00000467263 ZNF569Q5MCW4 686 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 LIN54Q6MZP7 749 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 ZNF793Q6ZN11 406 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 PIP4P1Q86T03 277 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMC4-207ENST00000467263 ADGRF4Q8IZF3 695 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 SRFBP1Q8NEF9 429 aaKnown RBP4.74□□□□□ -1.65
SMC4-207ENST00000467263 WIPF2Q8TF74 440 aaPredicted RBP4.74□□□□□ -1.65
SMC4-207ENST00000467263 HMGB4Q8WW32 186 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 KAT2BQ92831 832 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMC4-207ENST00000467263 CNTN6Q9UQ52 1028 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 ZBTB1Q9Y2K1 713 aa4.74□□□□□ -1.65
SMC4-207ENST00000467263 SPATA31A5Q5VU36 1347 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SPATA31A7Q8IWB4 1347 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A18PA6NE21 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A16PA6NEW6 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A9PA6NNJ1 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SLC38A8A6NNN8 435 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A5PA8MXJ8 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SYT5O00445 386 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 ACKR2O00590 384 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 UGDHO60701 494 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 USP12O75317 370 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 CNTN5O94779 1100 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 ALDOAP04075 364 aaKnown RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A15PP0C7V4 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM90A14PP0C7W9 464 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SERPINF1P36955 418 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SLC12A2P55011 1212 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FOXL2P58012 376 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 LEXMQ3ZCV2 418 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 MIDNQ504T8 468 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 LIPMQ5VYY2 423 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms