RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
HPS1-208ENST00000467246 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 NEBLO76041 1014 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 SNRPAP09012 282 aaKnown RBP11.77□□□□□ -0.53
HPS1-208ENST00000467246 ODC1P11926 461 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 YY1P25490 414 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 FDFT1P37268 417 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 ETV4P43268 484 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 SESN2P58004 480 aaPredicted RBP11.77□□□□□ -0.53
HPS1-208ENST00000467246 BNIP1Q12981 228 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 OLIG2Q13516 323 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 BSPRYQ5W0U4 402 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 CCSAPQ6IQ19 270 aaPredicted RBP11.77□□□□□ -0.53
HPS1-208ENST00000467246 CASC4Q6P4E1 433 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 OR10T2Q8NGX3 314 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 NTAN1Q96AB6 310 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.53
HPS1-208ENST00000467246 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 COLEC11Q9BWP8 271 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 PCDHA11Q9Y5I1 949 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 HMX2A2RU54 273 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 OPHN1O60890 802 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 KRT37O76014 449 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 TPI1P60174 286 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 NCALDP61601 193 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 NKX3-2P78367 333 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 NPWQ8N729 165 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 KLHDC9Q8NEP7 349 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 STAMBPL1Q96FJ0 436 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 VPS11Q9H270 941 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 MANSC1Q9H8J5 431 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 ECT2Q9H8V3 914 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 SLC17A6Q9P2U8 582 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 FAM159BA6NKW6 160 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 PPP1R12AO14974 1030 aaPredicted RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 RFPL1O75677 317 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 STK10O94804 968 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 UPP2O95045 317 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 DHRS4L1P0CG22 281 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 MGAT1P26572 445 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 SCAPQ12770 1279 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 OVGP1Q12889 678 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 SMAD1Q15797 465 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 MROH9Q5TGP6 573 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 CYB5D1Q6P9G0 228 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 PID1Q7Z2X4 250 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 TBC1D1Q86TI0 1168 aaPredicted RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 SCAMP5Q8TAC9 235 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 PGAP3Q96FM1 320 aaPredicted RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 SRPK1Q96SB4 655 aaKnown RBP11.76□□□□□ -0.53
HPS1-208ENST00000467246 TKTL2Q9H0I9 626 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 PRDM16Q9HAZ2 1276 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
HPS1-208ENST00000467246 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■■■■ 126.4
HPS1-208ENST00000467246 GSTA2P09210 222 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 ALADP13716 330 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 RAB27AP51159 221 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PARP6Q2NL67 630 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PLEKHG4Q58EX7 1191 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 LRRC8BQ6P9F7 803 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 METTL23Q86XA0 190 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
HPS1-208ENST00000467246 RSPH1Q8WYR4 309 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 SLC13A1Q9BZW2 595 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 NPHS2Q9NP85 383 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 OR12D3Q9UGF7 316 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 TRIM33Q9UPN9 1127 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 CHKBQ9Y259 395 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
HPS1-208ENST00000467246 SDR42E2A6NKP2 422 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 COPEO14579 308 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 CYP11A1P05108 521 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 AIF1P55008 147 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 KCNJ2P63252 427 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 CDK16Q00536 496 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 TUSC3Q13454 348 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PM20D1Q6GTS8 502 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 TAC4Q86UU9 113 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 C10orf82Q8WW14 230 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PGBD4Q96DM1 585 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 AGAP3Q96P47 875 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 PKMYT1Q99640 499 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 FERMT1Q9BQL6 677 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
HPS1-208ENST00000467246 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms