RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZNF503Q96F45 646 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MMS19Q96T76 1030 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 LBHD1Q9BQE6 289 aaPredicted RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 KCNK9Q9NPC2 374 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PCDHB16Q9NRJ7 776 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 DUSP22Q9NRW4 184 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 TBC1D22BQ9NU19 505 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 ABHD10Q9NUJ1 306 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 THAP1Q9NVV9 213 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 NRBP1Q9UHY1 535 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 GDAQ9Y2T3 454 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 COPG1Q9Y678 874 aaKnown RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 CCDC196A0A1B0GTZ2 297 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 FSD2A1L4K1 749 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 PGPEP1LA6NFU8 196 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 QSOX1O00391 747 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 FYB1O15117 783 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 TMPRSS11DO60235 418 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 USO1O60763 962 aaKnown RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 URI1O94763 535 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 TJP3O95049 919 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 C1RP00736 705 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 PNPLA4P41247 253 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 FOLR3P41439 243 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 POLD2P49005 469 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 VPS41P49754 854 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CDK7P50613 346 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 B4GALNT1Q00973 533 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 FOXE3Q13461 319 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 NAA25Q14CX7 972 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 RNASE12Q5GAN4 147 aaKnown RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 PCID2Q5JVF3 399 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 LIPMQ5VYY2 423 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 KIAA0895LQ68EN5 471 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 LRRC8DQ7L1W4 858 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 ZNF551Q7Z340 670 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CPLX4Q7Z7G2 160 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 LCORLQ8N3X6 602 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 PTGR2Q8N8N7 351 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 NGDNQ8NEJ9 315 aaKnown RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 ABHD11Q8NFV4 315 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 OR52L2PQ8NGH6 319 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 RFFLQ8WZ73 363 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 SLC9A6Q92581 669 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 ELP4Q96EB1 424 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 MASTLQ96GX5 879 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 GPR78Q96P69 363 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 PPP1R10Q96QC0 940 aaKnown RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CINPQ9BW66 212 aaPredicted RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 SNX15Q9NRS6 342 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 KLQ9UEF7 1012 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 CNOT7Q9UIV1 285 aaKnown RBP4.54□□□□□ -1.68
VPS13A-209ENST00000467124 GABRQQ9UN88 632 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 ADAMTS5Q9UNA0 930 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 B3GNT3Q9Y2A9 372 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 RPS6KL1Q9Y6S9 549 aa4.54□□□□□ -1.68
VPS13A-209ENST00000467124 MAST3O60307 1309 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 NPIPB13A6NJU9 1138 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 NPIPB5A8MRT5 1133 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 NPIPB4C9JG80 1138 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 H3BNC9 293 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 HNRNPRO43390 633 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ORC4O43929 436 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ALDOAP04075 364 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 CYP3A4P08684 503 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 DLDP09622 509 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 NPSP0C0P6 89 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 HKR1P10072 659 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 CYP2D6P10635 497 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 MAKP20794 623 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 MAPK4P31152 587 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 PSMC2P35998 433 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 RGS2P41220 211 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 SLC37A1P57057 533 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 EEFSECP57772 596 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 CYP4F2P78329 520 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 KCTD2Q14681 263 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 PTPAQ15257 358 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 TBCEQ15813 527 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 AP5B1Q2VPB7 878 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ARL13AQ5H913 290 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 PLAC9Q5JTB6 97 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 TMEM63BQ5T3F8 832 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 DENND2CQ68D51 928 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 C16orf54Q6UWD8 224 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ATF7IPQ6VMQ6 1270 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 Q6ZNX1 250 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 B4GALNT4Q76KP1 1039 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 MRGPREQ86SM8 312 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 VRK3Q8IV63 474 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 PDILTQ8N807 584 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 USP38Q8NB14 1042 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 LSM14AQ8ND56 463 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 RP9Q8TA86 221 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 AKAP1Q92667 903 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 EDC3Q96F86 508 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 HS6ST2Q96MM7 605 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms