RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 STIM1Q13586 685 aa5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 FAM110CQ1W6H9 321 aa5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 CCDC144NLQ6NUI1 221 aa5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 LVRNQ6Q4G3 990 aa5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 P2RY11Q96G91 374 aa5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 DDX23Q9BUQ8 820 aaKnown RBP5.09□□□□□ -1.59
PRPF40A-205ENST00000467114 SRGAP2BP0DMP2 458 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 TMIGD3P0DMS9 266 aaPredicted RBP5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 TRAPPC10P48553 1259 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 CDK7P50613 346 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 B4GALNT1Q00973 533 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 GAB1Q13480 694 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 PFKFB3Q16875 520 aaPredicted RBP5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 EARS2Q5JPH6 523 aaKnown RBP5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 ACSM6Q6P461 480 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 C16orf89Q6UX73 402 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 MYLK4Q86YV6 388 aaPredicted RBP5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 PELI3Q8N2H9 469 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 SMRP1Q8NCR6 262 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 NPIPB3Q92617 1050 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 GRAMD1AQ96CP6 724 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 VPS50Q96JG6 964 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 MAGEH1Q9H213 219 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 HIPK2Q9H2X6 1198 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 EPS8L2Q9H6S3 715 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 SEMA4BQ9NPR2 832 aaPredicted RBP5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 PRDM8Q9NQV8 689 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 GRHPRQ9UBQ7 328 aa5.08□□□□□ -1.6
PRPF40A-205ENST00000467114 TTBK1Q5TCY1 1321 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 PNMA6EA0A0J9YXQ4 647 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 INPPL1O15357 1258 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 DNPH1O43598 174 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 TCEA3O75764 348 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 GALNSP34059 522 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 CPA2P48052 419 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 RAE1P78406 368 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 TXNL4AP83876 142 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 OS9Q13438 667 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 BLMHQ13867 455 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 DAB2IPQ5VWQ8 1189 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 TRABD2AQ86V40 505 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 EXD3Q8N9H8 876 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 BCAS4Q8TDM0 211 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 OTUD7AQ8TE49 926 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 SLC22A17Q8WUG5 538 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 GLMPQ8WWB7 406 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 PRPF18Q99633 342 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 PABPC3Q9H361 631 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 USP29Q9HBJ7 922 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 AGO4Q9HCK5 861 aaKnown RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 ABHD10Q9NUJ1 306 aa5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 MAGED2Q9UNF1 606 aaPredicted RBP5.07□□□□□ -1.6
PRPF40A-205ENST00000467114 RRHO14718 337 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 RPP40O75818 363 aaKnown RBP5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 CER1O95813 267 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 CD63P08962 238 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 ALADP13716 330 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 DRD1P21728 446 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 DUSP1P28562 367 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 SEMA3BQ13214 749 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 UBAP2Q5T6F2 1119 aaKnown RBP5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 JMJD6Q6NYC1 403 aaPredicted RBP5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 GGT6Q6P531 493 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 FAM71DQ8N9W8 422 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 ATG16L2Q8NAA4 619 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 TMEM120AQ9BXJ8 343 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 NUAK2Q9H093 628 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 CDCP1Q9H5V8 836 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 MLXIPQ9HAP2 919 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 ZBTB1Q9Y2K1 713 aa5.06□□□□□ -1.6
PRPF40A-205ENST00000467114 IGLV5-39A0A0G2JS06 123 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 C2CD4BA6NLJ0 364 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 M0QYT0 321 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 PIP5K1CO60331 668 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 FAM155BO75949 473 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 PLAUP00749 431 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 GYS1P13807 737 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 IGFBP2P18065 325 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 ALDH18A1P54886 795 aaKnown RBP5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 FOXL2P58012 376 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 FAM3BP58499 235 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 TRIM14Q14142 442 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 CSHL1Q14406 222 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 KPNB1Q14974 876 aaKnown RBP5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 CCDC38Q502W7 563 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 TTC22Q5TAA0 569 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 ZNF549Q6P9A3 640 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 DLK2Q6UY11 383 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 KYAT3Q6YP21 454 aaKnown RBP5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 SLC44A2Q8IWA5 706 aaPredicted RBP5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 LAS2Q8IYD9 372 aa5.05□□□□□ -1.6
PRPF40A-205ENST00000467114 NRSN1Q8IZ57 195 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms