RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF683Q8IZ20 524 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 LGI2Q8N0V4 545 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
GPC1-207ENST00000466624 DDI1Q8WTU0 396 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 UBE2Q2Q8WVN8 375 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
GPC1-207ENST00000466624 SNRNP25Q9BV90 132 aaKnown RBP16.53■□□□□ 0.24
GPC1-207ENST00000466624 SIK2Q9H0K1 926 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 PPARGC1AQ9UBK2 798 aaKnown RBP16.53■□□□□ 0.24
GPC1-207ENST00000466624 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 PIAS3Q9Y6X2 628 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 DRGXA6NNA5 263 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 E9PAM4 449 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 NEDD8-MDP1E9PL57 170 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 KRT7P08729 469 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 ALADP13716 330 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 TYRP14679 529 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 TCF4P15884 667 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
GPC1-207ENST00000466624 HOXC13P31276 330 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 CTHP32929 405 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
GPC1-207ENST00000466624 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.24
GPC1-207ENST00000466624 DPYSL2Q16555 572 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 ANO4Q32M45 955 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 ARTNQ5T4W7 220 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 SYCE1Q8N0S2 351 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 EDAQ92838 391 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 EXOC4Q96A65 974 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 RPRD1AQ96P16 312 aaPredicted RBP16.52■□□□□ 0.24
GPC1-207ENST00000466624 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 ARHGEF3Q9NR81 526 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 TRIM10Q9UDY6 481 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 FBXO10Q9UK96 956 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 VANGL2Q9ULK5 521 aa16.52■□□□□ 0.24
GPC1-207ENST00000466624 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 A0A1B0GVM2 712 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
GPC1-207ENST00000466624 MAN2B1O00754 1011 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TRDMT1O14717 391 aaKnown RBP16.51■□□□□ 0.23
GPC1-207ENST00000466624 SPOPO43791 374 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TSPAN3O60637 253 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TBL1XO60907 577 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 RARAP10276 462 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 COMTP21964 271 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 TAS2R40P59535 323 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 PREPLQ4J6C6 727 aaPredicted RBP16.51■□□□□ 0.23
GPC1-207ENST00000466624 CHST9Q7L1S5 443 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 C14orf80Q86SX3 495 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 CPNE8Q86YQ8 564 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
GPC1-207ENST00000466624 RHOT1Q8IXI2 618 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 IGSF8Q969P0 613 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 MYEOVQ96EZ4 313 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 P2RY11Q96G91 374 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 SHDQ96IW2 340 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 EPAS1Q99814 870 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 FBXL21Q9UKT6 434 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 NEU3Q9UQ49 428 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 CHD5Q8TDI0 1954 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 VCANP13611 3396 aa16.51■□□□□ 0.23
GPC1-207ENST00000466624 F5P12259 2224 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 GRID2IPA4D2P6 1211 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 PSTPIP1O43586 416 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 CLDN11O75508 207 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 LRIG2O94898 1065 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 MOCS3O95396 460 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 GGCXP38435 758 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 OPRD1P41143 372 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 SSR1P43307 286 aaKnown RBP16.5■□□□□ 0.23
GPC1-207ENST00000466624 HCAR3P49019 387 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 SGSHP51688 502 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 CDH4P55283 916 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 STARD6P59095 220 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 RPS24P62847 133 aaKnown RBP16.5■□□□□ 0.23
GPC1-207ENST00000466624 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 TPRG1Q6ZUI0 275 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 PYROXD2Q8N2H3 581 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 TTC8Q8TAM2 541 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 ZYG11BQ9C0D3 744 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 DHX35Q9H5Z1 703 aaKnown RBP16.5■□□□□ 0.23
GPC1-207ENST00000466624 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms