RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 RINT1Q6NUQ1 792 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 MIS18BP1Q6P0N0 1132 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 PGBD2Q6P3X8 592 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 CCDC174Q6PII3 467 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 C16orf89Q6UX73 402 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 YTHDF3Q7Z739 585 aaKnown RBP4.77□□□□□ -1.65
EDEM3-205ENST00000466606 TTC30AQ86WT1 665 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 MYLK4Q86YV6 388 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-205ENST00000466606 C16orf71Q8IYS4 520 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-205ENST00000466606 PNISRQ8TF01 805 aaKnown RBP4.77□□□□□ -1.65
EDEM3-205ENST00000466606 PMM1Q92871 262 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 NUDT22Q9BRQ3 303 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 LRFN1Q9P244 771 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 CA14Q9ULX7 337 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 HEMK1Q9Y5R4 338 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-205ENST00000466606 RTEL1-TNFRSF6BF6WH68 1400 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 ABCC5O15440 1437 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 NWD1Q149M9 1564 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 RICTORQ6R327 1708 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 NINLQ9Y2I6 1382 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 ARHGAP5Q13017 1502 aa4.77□□□□□ -1.65
EDEM3-205ENST00000466606 MBD5Q9P267 1494 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 PPP6CO00743 305 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 RPP40O75818 363 aaKnown RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 GLP2RO95838 553 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 CELA2AP08217 269 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ABCG1P45844 678 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ZNF268Q14587 947 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 BTBD16Q32M84 506 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 TUBB8Q3ZCM7 444 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ZACNQ401N2 412 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 COLEC12Q5KU26 742 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 SLC2A7Q6PXP3 512 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 VSTM1Q6UX27 236 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 GATAD2AQ86YP4 633 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 CNGA4Q8IV77 575 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 SRRM1Q8IYB3 904 aaKnown RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 FAM71BQ8TC56 605 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ELOVL1Q9BW60 279 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 FBXO28Q9NVF7 368 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ZC3H13Q5T200 1668 aaKnown RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 PRDM15P57071 1507 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.76□□□□□ -1.65
EDEM3-205ENST00000466606 SYCP2Q9BX26 1530 aa4.76□□□□□ -1.65
EDEM3-205ENST00000466606 ATP10BO94823 1461 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 WDR17Q8IZU2 1322 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 NPATQ14207 1427 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 ANKRD50Q9ULJ7 1429 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 SMIM35A0A1B0GVV1 85 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 KIF28PB7ZC32 967 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 SKAP2O75563 359 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 PRR35P0CG20 571 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 FBLP22087 321 aaKnown RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 MMP8P22894 467 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 THBS4P35443 961 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 TRAPPC10P48553 1259 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 AGTR2P50052 363 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 YPEL5P62699 121 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 ICA1Q05084 483 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 FOXF2Q12947 444 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 PTK2BQ14289 1009 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 CNGA3Q16281 694 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 SRSF7Q16629 238 aaKnown RBP eCLIP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 PFKFB3Q16875 520 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 ANKRD40Q6AI12 368 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 SLC18B1Q6NT16 456 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 KYAT3Q6YP21 454 aaKnown RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 OSR1Q8TAX0 266 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 OVCA2Q8WZ82 227 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 NPIPB3Q92617 1050 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 AKAP1Q92667 903 aaKnown RBP eCLIP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 HIC2Q96JB3 615 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 MECRQ9BV79 373 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 NUAK2Q9H093 628 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 ARL8BQ9NVJ2 186 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 GAR1Q9NY12 217 aaKnown RBP4.75□□□□□ -1.65
EDEM3-205ENST00000466606 FLRT1Q9NZU1 646 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 RALGAPBQ86X10 1494 aa4.75□□□□□ -1.65
EDEM3-205ENST00000466606 CEP170BQ9Y4F5 1589 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-205ENST00000466606 TET3O43151 1660 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 KCNU1A8MYU2 1149 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 PRYO14603 147 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 RRHO14718 337 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 RNF8O76064 485 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 TUBB4AP04350 444 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 CCDC38Q502W7 563 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 C4orf46Q504U0 113 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 TFAP2DQ7Z6R9 452 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 GALNT16Q8N428 558 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 OR52L2PQ8NGH6 319 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 MAP4K1Q92918 833 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 RMDN3Q96TC7 470 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 CDCP1Q9H5V8 836 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 ASNSD1Q9NWL6 643 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 DACT1Q9NYF0 836 aa4.74□□□□□ -1.65
EDEM3-205ENST00000466606 SEMA5BQ9P283 1151 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms