RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	AMER2	Q8N7J2	671 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ENDOV	Q8N8Q3	282 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	RBM17	Q96I25	401 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HIC2	Q96JB3	615 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HS6ST2	Q96MM7	605 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MMS19	Q96T76	1030 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HTATIP2	Q9BUP3	242 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SYNPO2L	Q9H987	977 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PRDM16	Q9HAZ2	1276 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PREB	Q9HCU5	417 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TBX20	Q9UMR3	447 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	B3GNT3	Q9Y2A9	372 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	GDA	Q9Y2T3	454 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	COPG1	Q9Y678	874 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SPATA31A5	Q5VU36	1347 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SPATA31A6	Q5VVP1	1343 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SPATA31A7	Q8IWB4	1347 aa		4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538		B8ZZF3	427 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MATN3	O15232	486 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	FOXN1	O15353	648 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ANP32C	O43423	234 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	FZD7	O75084	574 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MBD4	O95243	580 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SGPL1	O95470	568 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ENO1	P06733	434 aa	Known RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	INSRR	P14616	1297 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CPA1	P15085	419 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TNFAIP3	P21580	790 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PGM1	P36871	562 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CASP2	P42575	452 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	LARS2	Q15031	903 aa	Known RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	FAAH2	Q6GMR7	532 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TMEM65	Q6PI78	240 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	NAPRT	Q6XQN6	538 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	DCDC5	Q6ZRR9	648 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ZNF627	Q7L945	461 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MAATS1	Q7Z4T9	603 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MAFA	Q8NHW3	353 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CLEC4C	Q8WTT0	213 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	RFFL	Q8WZ73	363 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	P2RY11	Q96G91	374 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	UROC1	Q96N76	676 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SENP7	Q9BQF6	1050 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TAOK3	Q9H2K8	898 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	RMI1	Q9H9A7	625 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ALG13	Q9NP73	1137 aa	Known RBP	4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ASIC5	Q9NY37	505 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MTMR4	Q9NYA4	1195 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	RCE1	Q9Y256	329 aa		4.85	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TCRBV5S1A1T	A0A578	114 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538		B4E171	279 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	UBE2Q2L	H0YL09	131 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	GRM8	O00222	908 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PRY	O14603	147 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	KLK10	O43240	276 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TULP3	O75386	442 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	GCAT	O75600	419 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ACP5	P13686	325 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HOXB9	P17482	250 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TSPAN7	P41732	249 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	STAT6	P42226	847 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	LIFR	P42702	1097 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ZNF84	P51523	738 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	NR1H2	P55055	460 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CDK18	Q07002	472 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	GOLGA8F	Q08AF8	430 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	GAB1	Q13480	694 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ALKBH1	Q13686	389 aa	Known RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SIM2	Q14190	667 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	KCNB1	Q14721	858 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	LRRC24	Q50LG9	513 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HYI	Q5T013	277 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TSTD2	Q5T7W7	516 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TMED8	Q6PL24	325 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SYNE3	Q6ZMZ3	975 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TCP11L2	Q8N4U5	519 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	LINS1	Q8NG48	757 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	NEU4	Q8WWR8	484 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	ST8SIA4	Q92187	359 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HDAC2	Q92769	488 aa	Known RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	MASTL	Q96GX5	879 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	DUSP26	Q9BV47	211 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	TRIM2	Q9C040	744 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	PAIP1	Q9H074	479 aa	Known RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	SLC22A11	Q9NSA0	550 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CNOT7	Q9UIV1	285 aa	Known RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	CD207	Q9UJ71	328 aa		4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC42BPA-211	ENST00000466538	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC42BPA-211	ENST00000466538	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC42BPA-211	ENST00000466538	TARM1	B6A8C7	271 aa		4.83	□□□□□ -1.64
CDC42BPA-211	ENST00000466538	POC1B-GALNT4	F8VUJ3	575 aa		4.83	□□□□□ -1.64
CDC42BPA-211	ENST00000466538	DHX16	O60231	1041 aa	Known RBP	4.83	□□□□□ -1.64
CDC42BPA-211	ENST00000466538	KAT7	O95251	611 aa		4.83	□□□□□ -1.64

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