RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 KLF6Q99612 283 aaPredicted RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 EPAS1Q99814 870 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PAIP2Q9BPZ3 127 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 DHRS4Q9BTZ2 278 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PPP1R12CQ9BZL4 782 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 ABCC13Q9NSE7 274 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 RRP15Q9Y3B9 282 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 ACTL7BQ9Y614 415 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 IRAK2O43187 625 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 FAM155BO75949 473 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 CPP00450 1065 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PRMT2P55345 433 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 CRADDP78560 199 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 OLIG2Q13516 323 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 SPARCL1Q14515 664 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 ADGRD1Q6QNK2 874 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 TMEM173Q86WV6 379 aaPredicted RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 SEPT8Q92599 483 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 SEC16BQ96JE7 1060 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 CYTH2Q99418 400 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PRDM16Q9HAZ2 1276 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 NKIRAS1Q9NYS0 192 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 STK10O94804 968 aaKnown RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 MOCS2O96007 188 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 MAGEA3P43357 314 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 NR1H3Q13133 447 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 UNC5AQ6ZN44 842 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SRLQ86TD4 932 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SIGLEC10Q96LC7 697 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SMC6Q96SB8 1091 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 FRMD8Q9BZ67 464 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 ELAC1Q9H777 363 aaKnown RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 FAM169AQ9Y6X4 670 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 NUP205Q92621 2012 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 FAM47DPA6NHR8 397 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 CXorf49A8MYA2 514 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 OPHN1O60890 802 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 TSHRP16473 764 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 KRT4P19013 534 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 PTPN3P26045 913 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 STX2P32856 288 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 RPA3P35244 121 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 FDFT1P37268 417 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 HCAR3P49019 387 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 EIF4EBP2Q13542 120 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 MZB1Q8WU39 189 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SHROOM3Q8TF72 1996 aa13.94□□□□□ -0.18
UBE4B-206ENST00000466379 SYN3O14994 580 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 UGT1A9O60656 530 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PAGE1O75459 146 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 C1QAP02745 245 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 ALDH2P05091 517 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 COL6A1P12109 1028 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 SESN2P58004 480 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 RTP2Q5QGT7 225 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 TRMT10BQ6PF06 316 aaKnown RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PDZD4Q76G19 769 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PPM1NQ8N819 430 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 CKAP2Q8WWK9 683 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 SMOC2Q9H3U7 446 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PPCSQ9HAB8 311 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 UGT1A7Q9HAW7 530 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 UGT1A10Q9HAW8 530 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 UGT1A8Q9HAW9 530 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 SMYD2Q9NRG4 433 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 ARHGEF38Q9NXL2 777 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 GMIPQ9P107 970 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 NEU3Q9UQ49 428 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PCDHB5Q9Y5E4 795 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 WDR27A2RRH5 827 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 CPB1P15086 417 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 IFT88Q13099 833 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 ZBTB17Q13105 803 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 RASA2Q15283 850 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 ZKSCAN8Q15776 578 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 SMAD1Q15797 465 aaKnown RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 NFE2Q16621 373 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms