RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SSU72P8A0A1W2PR75 194 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 F5H5T6 163 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 CCP110O43303 1012 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 AKR1B10O60218 316 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 MYBL1P10243 752 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 TIE1P35590 1138 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 TNFRSF4P43489 277 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 ASTE1Q2TB18 679 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 C10orf76Q5T2E6 689 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 STRADAQ7RTN6 431 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 SPEM1Q8N4L4 309 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 RPLP0P6Q8NHW5 317 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 WFDC5Q8TCV5 224 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 USP33Q8TEY7 942 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 TRIM11Q96F44 468 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 SLC2A11Q9BYW1 496 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 NHEJ1Q9H9Q4 299 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-202ENST00000465601 ZDHHC4Q9NPG8 344 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 TMEM51Q9NW97 253 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 VANGL2Q9ULK5 521 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 NENFQ9UMX5 172 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 PAXBP1Q9Y5B6 917 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 WDR87Q6ZQQ6 2873 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 NUP205Q92621 2012 aa12.81□□□□□ -0.36
CHPF2-202ENST00000465601 RIF1Q5UIP0 2472 aaKnown RBP12.8□□□□□ -0.36
CHPF2-202ENST00000465601 TYW5A2RUC4 315 aaKnown RBP12.8□□□□□ -0.36
CHPF2-202ENST00000465601 TMEM191CA6NGB0 347 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 PRRT4C9JH25 899 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 H0Y858 1186 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CXCL12P48061 93 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 GALCP54803 685 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 HDAC4P56524 1084 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 SATB1Q01826 763 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 TCF15Q12870 199 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 MTA1Q13330 715 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 SLC18A3Q16572 532 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 FBXL22Q6P050 247 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 SCYL2Q6P3W7 929 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-202ENST00000465601 MAML2Q8IZL2 1156 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC33Q8N5R6 958 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-202ENST00000465601 PRRX2Q99811 253 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 IER2Q9BTL4 223 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 SPTLC3Q9NUV7 552 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 HCN2Q9UL51 889 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 SLC27A6Q9Y2P4 619 aa12.8□□□□□ -0.36
CHPF2-202ENST00000465601 VPS13AQ96RL7 3174 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 CHURC1-FNTBB4DL54 471 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 ATG13O75143 517 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
CHPF2-202ENST00000465601 PSMA2P25787 234 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 HLA-FP30511 346 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 HOXC13P31276 330 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 ADRA1BP35368 520 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 KIR2DL1P43626 348 aaPredicted RBP12.79□□□□□ -0.36
CHPF2-202ENST00000465601 IRAK1P51617 712 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 CCR3P51677 355 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 MRPS21P82921 87 aaKnown RBP12.79□□□□□ -0.36
CHPF2-202ENST00000465601 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
CHPF2-202ENST00000465601 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 MFN1Q8IWA4 741 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC185Q8N715 623 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 FIBINQ8TAL6 211 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 PACSIN1Q9BY11 444 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 MAGEB5Q9BZ81 275 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 MRPL47Q9HD33 250 aaKnown RBP12.79□□□□□ -0.36
CHPF2-202ENST00000465601 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 SCINQ9Y6U3 715 aa12.79□□□□□ -0.36
CHPF2-202ENST00000465601 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 H0Y626 953 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 SRGAP2O75044 1071 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CYP1A2P05177 515 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
CHPF2-202ENST00000465601 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms