RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 CENPCQ03188 943 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 TAF5Q15542 800 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 C2CD6Q53TS8 623 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 SPDYCQ5MJ68 293 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 N4BP2L1Q5TBK1 243 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-205ENST00000465238 DAB2IPQ5VWQ8 1189 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 PPP1R2P3Q6NXS1 205 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 MSANTD2Q6P1R3 559 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 OLFML1Q6UWY5 402 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 MMS22LQ6ZRQ5 1243 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 ZNF571Q7Z3V5 609 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-205ENST00000465238 VPS36Q86VN1 386 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 PGBD3Q8N328 593 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 OR8K1Q8NGG5 319 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 RLN3Q8WXF3 142 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 MRFAP1L1Q96HT8 127 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 C11orf70Q9BRQ4 267 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 BBS2Q9BXC9 721 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 DNAJC17Q9NVM6 304 aaKnown RBP18.42■□□□□ 0.54
COL7A1-205ENST00000465238 ZNHIT6Q9NWK9 470 aaKnown RBP18.42■□□□□ 0.54
COL7A1-205ENST00000465238 ADAM22Q9P0K1 906 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 NAALADL1Q9UQQ1 740 aa18.42■□□□□ 0.54
COL7A1-205ENST00000465238 PI4KAP42356 2102 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 C4orf47A7E2U8 309 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 NEDD8-MDP1E9PL57 170 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 GOLGA8SH3BPF8 625 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 GRAP2O75791 330 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 CALB1P05937 261 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 FYNP06241 537 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 HOXB2P14652 356 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 TYRP14679 529 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 PMLP29590 882 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 NTSR1P30989 418 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 MAP7D1Q3KQU3 841 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 FAM102AQ5T9C2 384 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 ACAD10Q6JQN1 1059 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 SLC26A9Q7LBE3 791 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 XYLT1Q86Y38 959 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 PHF13Q86YI8 300 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 DEFB106AQ8N104 65 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 PIGKQ92643 395 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 PIWIL1Q96J94 861 aaKnown RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 SYT11Q9BT88 431 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 DCLK3Q9C098 648 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 TMEM9BQ9NQ34 198 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 EVLQ9UI08 416 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 ANGPTL2Q9UKU9 493 aa18.41■□□□□ 0.54
COL7A1-205ENST00000465238 HBS1LQ9Y450 684 aaKnown RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 TNRC6BQ9UPQ9 1833 aaKnown RBP18.41■□□□□ 0.54
COL7A1-205ENST00000465238 TRIM24O15164 1050 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 STC2O76061 302 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 SCNN1AP37088 669 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 DPP6P42658 865 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 RNASE9P60153 205 aaKnown RBP18.4■□□□□ 0.54
COL7A1-205ENST00000465238 CDK17Q00537 523 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 DCAF6Q58WW2 860 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 SYPL2Q5VXT5 272 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 HGSNATQ68CP4 663 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 SDE2Q6IQ49 451 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 TPGS1Q6ZTW0 290 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 DRC7Q8IY82 874 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 DQX1Q8TE96 717 aaKnown RBP18.4■□□□□ 0.54
COL7A1-205ENST00000465238 PLD4Q96BZ4 506 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
COL7A1-205ENST00000465238 HCN2Q9UL51 889 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 ZNF510Q9Y2H8 683 aa18.4■□□□□ 0.54
COL7A1-205ENST00000465238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 TMCO5BA8MYB1 307 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 PATE3B3GLJ2 98 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 ZBTB24O43167 697 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 MFAP3LO75121 409 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 DAB1O75553 588 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 GZMAP12544 262 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 HNRNPH3P31942 346 aaKnown RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 HARS2P49590 506 aaKnown RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 ADKP55263 362 aaKnown RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 TBX4P57082 545 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 TBX2Q13207 712 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 TRIP4Q15650 581 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 Q6ZNB5 142 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 PHLDB2Q86SQ0 1253 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 SYT12Q8IV01 421 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 CNGA4Q8IV77 575 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 TMEFF1Q8IYR6 380 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 CHPFQ8IZ52 775 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 FRMD1Q8N878 549 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 SERPINB11Q96P15 392 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 SLC2A13Q96QE2 648 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 DNAJC7Q99615 494 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL7A1-205ENST00000465238 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.53
COL7A1-205ENST00000465238 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL7A1-205ENST00000465238 MSI1O43347 362 aaKnown RBP18.38■□□□□ 0.53
COL7A1-205ENST00000465238 GABRG2P18507 467 aa18.38■□□□□ 0.53
COL7A1-205ENST00000465238 CORO1AP31146 461 aaKnown RBP18.38■□□□□ 0.53
COL7A1-205ENST00000465238 NOS2P35228 1153 aa18.38■□□□□ 0.53
COL7A1-205ENST00000465238 MATKP42679 507 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms