RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SPATA31C2B4DYI2 1134 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 M0QYV0 167 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 MDM4O15151 490 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 DCXO43602 365 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 GALR2O43603 387 aaPredicted RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 B4GALT4O60513 344 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 TRMUO75648 421 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 STK10O94804 968 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 METTL18O95568 372 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 ZFXP17010 805 aaPredicted RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 PGAM1P18669 254 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 HMGB2P26583 209 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 PIK3R1P27986 724 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 SLC5A2P31639 672 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 GARSP41250 739 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 GPD2P43304 727 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 ADARP55265 1226 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 FLOT2Q14254 428 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 RFTN1Q14699 578 aaPredicted RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 VWA5B1Q5TIE3 1220 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 OLFML2BQ68BL8 750 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 TRNP1Q6NT89 227 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 KYQ8NBH2 561 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 KBTBD7Q8WVZ9 684 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 ANKRD36BP1Q96IX9 119 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 QKIQ96PU8 341 aaKnown RBP eCLIP7.49□□□□□ -1.211e-7■■■□□ 18.2
USP48-206ENST00000464577 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 NAT9Q9BTE0 207 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 SHCBP1LQ9BZQ2 653 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 COG4Q9H9E3 785 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 ZNF302Q9NR11 478 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 EIF2B3Q9NR50 452 aaKnown RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 TBCCD1Q9NVR7 557 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 MORF4L1Q9UBU8 362 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 PGAP2Q9UHJ9 254 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 CEPT1Q9Y6K0 416 aa7.49□□□□□ -1.21
USP48-206ENST00000464577 LOC100653049A0A140TA62 436 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 RGSL1A5PLK6 1076 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 YDJCA8MPS7 323 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 MSCO60682 206 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CILPO75339 1184 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 KRT34O76011 436 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 VDRP11473 427 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 PDGFRAP16234 1089 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ZNF23P17027 643 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CDH2P19022 906 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ADORA2AP29274 412 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 NR2C2P49116 596 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 SCNN1BP51168 640 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 TFAMQ00059 246 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 PEX6Q13608 980 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 DPYSQ14117 519 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 TARBP2Q15633 366 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ZNF667Q5HYK9 610 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 LRRC8BQ6P9F7 803 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 DHRS4L2Q6PKH6 230 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ZBTB33Q86T24 672 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ERI1Q8IV48 349 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 PGAM4Q8N0Y7 254 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CPSF7Q8N684 471 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 EFCAB3Q8N7B9 438 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 RP9Q8TA86 221 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 CNBD2Q96M20 576 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 BIRC8Q96P09 236 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 PRPF18Q99633 342 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ACO2Q99798 780 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 FERMT1Q9BQL6 677 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 MRPL1Q9BYD6 325 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ELOVL4Q9GZR5 314 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 MAF1Q9H063 256 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CYP3A43Q9HB55 503 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 TMEM216Q9P0N5 145 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 GNEQ9Y223 722 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 HEY1Q9Y5J3 304 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 AK5Q9Y6K8 562 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 SQORQ9Y6N5 450 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 IGKV6D-21A0A0A0MT36 114 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 WDR27A2RRH5 827 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 KPNA7A9QM74 516 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 E9PBE3 544 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 KLHL41O60662 606 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 COQ9O75208 318 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ZMPSTE24O75844 475 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 BCAS2O75934 225 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 HSPA4LO95757 839 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ATP6V1B1P15313 513 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 XRCC1P18887 633 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 GP5P40197 560 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ALDH3B2P48448 385 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 NUDT2P50583 147 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CDK9P50750 372 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 THOP1P52888 689 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms