RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PRICKLE1Q96MT3 831 aaPredicted RBP15.02■□□□□ -0
SQSTM1-205ENST00000464493 SIK2Q9H0K1 926 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 NHEJ1Q9H9Q4 299 aaPredicted RBP15.02■□□□□ -0
SQSTM1-205ENST00000464493 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
SQSTM1-205ENST00000464493 ANLNQ9NQW6 1124 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 STIM2Q9P246 746 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 MYO1AQ9UBC5 1043 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 SLC27A6Q9Y2P4 619 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 HS3ST4Q9Y661 456 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 SCINQ9Y6U3 715 aa15.02■□□□□ -0
SQSTM1-205ENST00000464493 TMEM191CA6NGB0 347 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 CHURC1-FNTBB4DL54 471 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 I6L893 689 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 LAMTOR5O43504 91 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 DESP17661 470 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 COL9A1P20849 921 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 CXCL12P48061 93 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 HDAC4P56524 1084 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 MRPS21P82921 87 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 RAB6CQ53S08 254 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 C10orf76Q5T2E6 689 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 ACBD5Q5T8D3 534 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 RPLP0P6Q8NHW5 317 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 USP33Q8TEY7 942 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 C1orf74Q96LT6 269 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 HAPLN3Q96S86 360 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 CNPY3Q9BT09 278 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 RAB6CQ9H0N0 254 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 THAP2Q9H0W7 228 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 NENFQ9UMX5 172 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 STARD13Q9Y3M8 1113 aa15.01□□□□□ -0.01
SQSTM1-205ENST00000464493 ANTXRLA6NF34 631 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 PRRT4C9JH25 899 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 CCP110O43303 1012 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 ADRA1BP35368 520 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 KIR2DL1P43626 348 aaPredicted RBP15□□□□□ -0.01
SQSTM1-205ENST00000464493 CCR3P51677 355 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 GALCP54803 685 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 OGDHQ02218 1023 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 ANGPT1Q15389 498 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 ARL13BQ3SXY8 428 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 RABGAP1LQ5R372 815 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 EMC10Q5UCC4 262 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 RNF43Q68DV7 783 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 FBXL22Q6P050 247 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 PKN3Q6P5Z2 889 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 C14orf80Q86SX3 495 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 CCDC117Q8IWD4 279 aaPredicted RBP15□□□□□ -0.01
SQSTM1-205ENST00000464493 MAML2Q8IZL2 1156 aaPredicted RBP15□□□□□ -0.01
SQSTM1-205ENST00000464493 CARNMT1Q8N4J0 409 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF557Q8N988 423 aaPredicted RBP15□□□□□ -0.01
SQSTM1-205ENST00000464493 PRSS33Q8NF86 280 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 FIBINQ8TAL6 211 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 KCNV2Q8TDN2 545 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 RPRD1AQ96P16 312 aaPredicted RBP15□□□□□ -0.01
SQSTM1-205ENST00000464493 TMPRSS4Q9NRS4 437 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 VANGL2Q9ULK5 521 aa15□□□□□ -0.01
SQSTM1-205ENST00000464493 MYO18AQ92614 2054 aaKnown RBP14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 CYP1A2P05177 515 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 PSMA2P25787 234 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 CDC25BP30305 580 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 HLA-FP30511 346 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 TIE1P35590 1138 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 GGCXP38435 758 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 SATB1Q01826 763 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 TCF15Q12870 199 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 GEN1Q17RS7 908 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 TTC39BQ5VTQ0 682 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 SCYL2Q6P3W7 929 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 LRRC31Q6UY01 552 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 ANKS1BQ7Z6G8 1248 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 MFN1Q8IWA4 741 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 FNIP1Q8TF40 1166 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 IGSF8Q969P0 613 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 C2orf42Q9NWW7 574 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 SNX10Q9Y5X0 201 aa14.99□□□□□ -0.01
SQSTM1-205ENST00000464493 H0Y626 953 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 H0Y858 1186 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 TIMM44O43615 452 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 LUC7L3O95232 432 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 H2AFZP0C0S5 128 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 PTPN5P54829 565 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 CSTF1Q05048 431 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 CDH18Q13634 790 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 C5orf22Q49AR2 442 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 HSF5Q4G112 596 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 H2AFVQ71UI9 128 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 SYT13Q7L8C5 426 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 TRMT11Q7Z4G4 463 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 CCDC33Q8N5R6 958 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 ALLCQ8N6M5 410 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 CCDC185Q8N715 623 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.98□□□□□ -0.011e-7■□□□□ 10.8
SQSTM1-205ENST00000464493 ZNF513Q8N8E2 541 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 IL17RCQ8NAC3 791 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 WFDC5Q8TCV5 224 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms