RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PTPRSQ13332 1948 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PLXNA3P51805 1871 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 DMDP11532 3685 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 hCG_1984214I3L0E3 225 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 NEMP1O14524 444 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 ATP9AO75110 1047 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 AOC1P19801 751 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 PDCP20941 246 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 CDC25AP30304 524 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 APOBEC3AP31941 199 aaPredicted RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 SREBF1P36956 1147 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 NUCB2P80303 420 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 FAM189BP81408 668 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 TRIM29Q14134 588 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 PGM5Q15124 567 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 NONOQ15233 471 aaKnown RBP eCLIP4□□□□□ -1.77
SCFD1-204ENST00000463622 CSRP2Q16527 193 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 LETM2Q2VYF4 491 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 FBXO47Q5MNV8 452 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 ARHGEF16Q5VV41 709 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 ANKS6Q68DC2 871 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 TAF2Q6P1X5 1199 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 STRA8Q7Z7C7 330 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 MRGPRGQ86SM5 289 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 ZNF713Q8N859 430 aaPredicted RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 LINC00301Q8NCQ3 95 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 USP7Q93009 1102 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 MBOAT7Q96N66 472 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 KCTD10Q9H3F6 313 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 SMOC2Q9H3U7 446 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 GOLPH3LQ9H4A5 285 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 PXMP2Q9NR77 195 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 MAP3K20Q9NYL2 800 aaKnown RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 EIF2B4Q9UI10 523 aaKnown RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 FBXO2Q9UK22 296 aaPredicted RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 DMRT1Q9Y5R6 373 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 FRYLO94915 3013 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 GPR179Q6PRD1 2367 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 SIP14410 1827 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 TRIP12Q14669 1992 aaPredicted RBP4□□□□□ -1.77
SCFD1-204ENST00000463622 ZFHX4Q86UP3 3567 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 MYH7BA7E2Y1 1941 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 NRCAMQ92823 1304 aa4□□□□□ -1.77
SCFD1-204ENST00000463622 CHD6Q8TD26 2715 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CEP250Q9BV73 2442 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 A0A087WWV3 80 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CCDC194A0A1B0GVG4 234 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MBLAC1A4D2B0 266 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 AHRRA9YTQ3 701 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 C2CD4DB7Z1M9 353 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LEFTY2O00292 366 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NRP1O14786 923 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 RAMP2O60895 175 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GGPS1O95749 300 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LGALS2P05162 132 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GHRP10912 638 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MYCLP12524 364 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GNA11P29992 359 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GZMKP49863 264 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NRG3P56975 720 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 STRN3Q13033 797 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 ITGB3BPQ13352 177 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 ANGPT1Q15389 498 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LAIR1Q6GTX8 287 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 SHC4Q6S5L8 630 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CLEC17AQ6ZS10 378 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NEK8Q86SG6 692 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 RASSF3Q86WH2 238 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 KIAA2013Q8IYS2 634 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 ULK2Q8IYT8 1036 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 SAMD3Q8N6K7 520 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GLB1L3Q8NCI6 653 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 ETNPPLQ8TBG4 499 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NECTIN4Q96NY8 510 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 FAM193BQ96PV7 902 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 RTP3Q9BQQ7 232 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 TEX101Q9BY14 249 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LMBRD1Q9NUN5 540 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 KCNG1Q9UIX4 513 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LZTS1Q9Y250 596 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 UBIAD1Q9Y5Z9 338 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 OTOGLQ3ZCN5 2332 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 DDX39AO00148 427 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MSH4O15457 936 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NRP2O60462 931 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CCNT1O60563 726 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 FGF18O76093 207 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 PEX11BO96011 259 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CYP3A4P08684 503 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 STAG3L1P0CL83 205 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NCLP19338 710 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 UBA1P22314 1058 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CIITAP33076 1130 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 PTGS2P35354 604 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 TECP42680 631 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GPR15P49685 360 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CDK17Q00537 523 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 APBA1Q02410 837 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms