RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CCDC134Q9H6E4 229 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
VAPB-203ENST00000463370 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
VAPB-203ENST00000463370 CXorf49A8MYA2 514 aaPredicted RBP13.19□□□□□ -0.3
VAPB-203ENST00000463370 TPSB2P20231 275 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 PRMT2P55345 433 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
VAPB-203ENST00000463370 CRADDP78560 199 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 MRPL58Q14197 206 aaKnown RBP13.19□□□□□ -0.3
VAPB-203ENST00000463370 TPSAB1Q15661 275 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 TAX1BP1Q86VP1 789 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 KLF6Q99612 283 aaPredicted RBP13.19□□□□□ -0.3
VAPB-203ENST00000463370 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 SMYD2Q9NRG4 433 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 ABCC13Q9NSE7 274 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 ZC3H7BQ9UGR2 993 aaKnown RBP13.19□□□□□ -0.3
VAPB-203ENST00000463370 SLC27A5Q9Y2P5 690 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 ACTL7BQ9Y614 415 aa13.19□□□□□ -0.3
VAPB-203ENST00000463370 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 VNN2O95498 520 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 PTPN3P26045 913 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 HCAR3P49019 387 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 CBLBQ13191 982 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 SPARCL1Q14515 664 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 TRMT10BQ6PF06 316 aaKnown RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 SEPT8Q92599 483 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 EPAS1Q99814 870 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 SMOC2Q9H3U7 446 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 GRID1Q9ULK0 1009 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 ZNF638Q14966 1978 aaKnown RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 SYN3O14994 580 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 UGT1A9O60656 530 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 PAGE1O75459 146 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 COL6A1P12109 1028 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 MSH2P43246 934 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 ZBTB17Q13105 803 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 RASA2Q15283 850 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 RWDD4Q6NW29 188 aaKnown RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 DEFB128Q7Z7B8 93 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 UNC5BQ8IZJ1 945 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 DYDC1Q8WWB3 177 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 CYTH2Q99418 400 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 RNF208Q9H0X6 261 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
VAPB-203ENST00000463370 UGT1A7Q9HAW7 530 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 UGT1A10Q9HAW8 530 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 UGT1A8Q9HAW9 530 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 PRDM16Q9HAZ2 1276 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 NDFIP2Q9NV92 336 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
VAPB-203ENST00000463370 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 GOLGA8RI6L899 631 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 OPHN1O60890 802 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 MOCS2O96007 188 aaPredicted RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 ALDH2P05091 517 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TSHRP16473 764 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 KRT4P19013 534 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 FGFR3P22607 806 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 CYP2C18P33260 490 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 C4orf22Q6V702 233 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 SRLQ86TD4 932 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 DENND1AQ8TEH3 1009 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 GMIPQ9P107 970 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 FAM169AQ9Y6X4 670 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 PTPRDP23468 1912 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TTC3P53804 2025 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TCP11X1B4DZS4 312 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TYROBPO43914 113 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 TBX18O95935 607 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 GALTP07902 379 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 VIMP08670 466 aaKnown RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 CCL5P13501 91 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 CD68P34810 354 aaPredicted RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 PPIDQ08752 370 aaKnown RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 GALNT2Q10471 571 aa13.17□□□□□ -0.3
VAPB-203ENST00000463370 NFE2Q16621 373 aaPredicted RBP13.17□□□□□ -0.3
VAPB-203ENST00000463370 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms