RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RFWD3Q6PCD5 774 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 KIAA0907Q7Z7F0 614 aaPredicted RBP15.99■□□□□ 0.15
SKA3-204ENST00000462482 GLRX5Q86SX6 157 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 UBR7Q8N806 425 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 PNPLA1Q8N8W4 532 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 TFAP2BQ92481 460 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 SKA1Q96BD8 255 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 TIGD1Q96MW7 591 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 SERPINB11Q96P15 392 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 MIS12Q9H081 205 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 IL21RQ9HBE5 538 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 OSGEPQ9NPF4 335 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 PRSS16Q9NQE7 514 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 ST7Q9NRC1 585 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.99■□□□□ 0.15
SKA3-204ENST00000462482 BICDL2A1A5D9 508 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 CAPN9O14815 690 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 BRD2P25440 801 aaKnown RBP15.98■□□□□ 0.15
SKA3-204ENST00000462482 CD27P26842 260 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 GRIA4P48058 902 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 BECN1Q14457 450 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 INAVAQ3KP66 663 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 RNF219Q5W0B1 726 aaPredicted RBP15.98■□□□□ 0.15
SKA3-204ENST00000462482 CARNMT1Q8N4J0 409 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 FIBINQ8TAL6 211 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 TM9SF3Q9HD45 589 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 LHX6Q9UPM6 363 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 FNDC3AQ9Y2H6 1198 aaKnown RBP15.98■□□□□ 0.15
SKA3-204ENST00000462482 CEP83Q9Y592 693 aa15.98■□□□□ 0.15
SKA3-204ENST00000462482 GOLGA6L7A0A1B0GV03 622 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 CBFA2T3O75081 653 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 GNA14O95837 355 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 IGLV3-27P01718 113 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 APOEP02649 317 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 CD70P32970 193 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 ACADSBP45954 432 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 SGSHP51688 502 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 C21orf59P57076 290 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 GCNT1Q02742 428 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 SCAPQ12770 1279 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 NNTQ13423 1086 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 PTPRNQ16849 979 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 KIF19Q2TAC6 998 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 ISM2Q6H9L7 571 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 KLHL10Q6JEL2 608 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 LRSAM1Q6UWE0 723 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 C1orf216Q8TAB5 229 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
SKA3-204ENST00000462482 CCDC86Q9H6F5 360 aaKnown RBP15.97■□□□□ 0.15
SKA3-204ENST00000462482 KIAA1522Q9P206 1035 aaPredicted RBP15.97■□□□□ 0.15
SKA3-204ENST00000462482 TLR6Q9Y2C9 796 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 ANKRD6Q9Y2G4 727 aa15.97■□□□□ 0.15
SKA3-204ENST00000462482 FAM47DPA6NHR8 397 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 MED7O43513 233 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 DFNA5O60443 496 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 MOCS2O96007 188 aaPredicted RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 KRT5P13647 590 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 CSKP41240 450 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 GRK6P43250 576 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 CCT8P50990 548 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 FAM133BQ5BKY9 247 aaKnown RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 CCNI2Q6ZMN8 369 aaPredicted RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 USP30Q70CQ3 517 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 RRAGAQ7L523 313 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 PROSER1Q86XN7 944 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 KDM1BQ8NB78 822 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 DQX1Q8TE96 717 aaKnown RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 IGSF8Q969P0 613 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 TTC17Q96AE7 1141 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 BIRC7Q96CA5 298 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 OMDQ99983 421 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 ACE2Q9BYF1 805 aaPredicted RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 RSPH9Q9H1X1 276 aaPredicted RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
SKA3-204ENST00000462482 FBXL12Q9NXK8 326 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 TJP2Q9UDY2 1190 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 SLC12A6Q9UHW9 1150 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 SNX11Q9Y5W9 270 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 LAMA1P25391 3075 aa15.96■□□□□ 0.15
SKA3-204ENST00000462482 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.14
SKA3-204ENST00000462482 CHD6Q8TD26 2715 aa15.96■□□□□ 0.14
SKA3-204ENST00000462482 PCDH15Q96QU1 1955 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 LRRC72A6NJI9 287 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 GOLGA8CPA6NN73 597 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 SLC6A4P31645 630 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 NNMTP40261 264 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 BNC1Q01954 994 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 HNRNPA1L2Q32P51 320 aaKnown RBP15.95■□□□□ 0.14
SKA3-204ENST00000462482 KIAA0895LQ68EN5 471 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 SLCO6A1Q86UG4 719 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 DHX40Q8IX18 779 aaKnown RBP15.95■□□□□ 0.14
SKA3-204ENST00000462482 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 EHBP1Q8NDI1 1231 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 WFDC5Q8TCV5 224 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 CLEC4CQ8WTT0 213 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 NELFBQ8WX92 580 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 KAT5Q92993 513 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms