RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 ISM2Q6H9L7 571 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 NADSYN1Q6IA69 706 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 LMO3Q8TAP4 145 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 SETD7Q8WTS6 366 aaKnown RBP16.74■□□□□ 0.27
COL7A1-204ENST00000462475 MYEOVQ96EZ4 313 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 MTG2Q9H4K7 406 aa16.74■□□□□ 0.27
COL7A1-204ENST00000462475 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 TAF4O00268 1085 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 PSMA7O14818 248 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 PMM2O15305 246 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 SEMA4FO95754 770 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 CAPNS1P04632 268 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 ATP5BP06576 529 aaKnown RBP16.73■□□□□ 0.27
COL7A1-204ENST00000462475 SLC11A2P49281 568 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
COL7A1-204ENST00000462475 TBX4P57082 545 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 KIF19Q2TAC6 998 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 MPP7Q5T2T1 576 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 IL27RAQ6UWB1 636 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 LAYNQ6UX15 382 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 RRAGAQ7L523 313 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 GLRX5Q86SX6 157 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 SLCO6A1Q86UG4 719 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 MFN1Q8IWA4 741 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 UNC45BQ8IWX7 931 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-204ENST00000462475 LMLNQ96KR4 655 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 FCRL2Q96LA5 508 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-204ENST00000462475 CEP63Q96MT8 703 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 MIS12Q9H081 205 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 FBRSQ9HAH7 460 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 STIM2Q9P246 746 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 MAN1B1Q9UKM7 699 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 CACNA1GO43497 2377 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 NUMA1Q14980 2115 aa16.73■□□□□ 0.27
COL7A1-204ENST00000462475 IRAK2O43187 625 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 DNTTP04053 509 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 FYNP06241 537 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 POLR2EP19388 210 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 RPS24P62847 133 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 RING1Q06587 406 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 STIM1Q13586 685 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 KLHL10Q6JEL2 608 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 TTI2Q6NXR4 508 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 HJURPQ8NCD3 748 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 DQX1Q8TE96 717 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 GOLGA1Q92805 767 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 BIRC7Q96CA5 298 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 MYO19Q96H55 970 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 HSFY1Q96LI6 401 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 IRX2Q9BZI1 471 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 BTBD1Q9H0C5 482 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 TM9SF3Q9HD45 589 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 INTS6Q9UL03 887 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 APOBEC2Q9Y235 224 aaKnown RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 SNX11Q9Y5W9 270 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 ANKRD11Q6UB99 2663 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-204ENST00000462475 ITPR1Q14643 2758 aa16.72■□□□□ 0.27
COL7A1-204ENST00000462475 CELSR3Q9NYQ7 3312 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 FBXO21O94952 628 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 FSBPO95073 299 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 CSKP41240 450 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 ZBTB16Q05516 673 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 SCAPQ12770 1279 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 STILQ15468 1287 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 TTC31Q49AM3 519 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-204ENST00000462475 ZNF776Q68DI1 518 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-204ENST00000462475 PROSER1Q86XN7 944 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 ADAM32Q8TC27 787 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 AZIN2Q96A70 460 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 ORAI3Q9BRQ5 295 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 NUCKS1Q9H1E3 243 aaKnown RBP16.71■□□□□ 0.27
COL7A1-204ENST00000462475 TOR4AQ9NXH8 423 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 BTBD3Q9Y2F9 522 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 PCDHGB2Q9Y5G2 931 aa16.71■□□□□ 0.27
COL7A1-204ENST00000462475 FLRT2O43155 660 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 HOXB3P14651 431 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-204ENST00000462475 BMP6P22004 513 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 GRIA4P48058 902 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 GCNT1Q02742 428 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 CCNI2Q6ZMN8 369 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-204ENST00000462475 DBX2Q6ZNG2 339 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 SCUBE3Q8IX30 993 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 CARNMT1Q8N4J0 409 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 FIBINQ8TAL6 211 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 NELFBQ8WX92 580 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 TTC17Q96AE7 1141 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 FAM149B1Q96BN6 582 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 SLC39A13Q96H72 371 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
COL7A1-204ENST00000462475 SERPINB11Q96P15 392 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms