RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 RAD54BQ9Y620 910 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 EYSQ5T1H1 3165 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 PATJQ8NI35 1801 aa11.02□□□□□ -0.64
RTF1-202ENST00000462276 hCG_1818297A0A087WSY0 165 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 TYW5A2RUC4 315 aaKnown RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 WASH4PA8MWX3 477 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 E9PAM4 449 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 I6L893 689 aaPredicted RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 GREM1O60565 184 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 LRIG2O94898 1065 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 FGGP02679 453 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 LAMP2P13473 410 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 RHOQP17081 205 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 TGM2P21980 687 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 EPHB2P29323 1055 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 CXCR5P32302 372 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 SERPINB6P35237 376 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 OXCT1P55809 520 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 USP4Q13107 963 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 SKIV2LQ15477 1246 aaKnown RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 ZNF77Q15935 545 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 CA9Q16790 459 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 LONRF2Q1L5Z9 754 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 ANKRD20A8PQ5CZ79 823 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 FAM78AQ5JUQ0 283 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 PIK3R6Q5UE93 754 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 DCAF12L1Q5VU92 463 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 FBXL22Q6P050 247 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 MTSS1LQ765P7 747 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 CHSY1Q86X52 802 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 CEP112Q8N8E3 955 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 PSMB7Q99436 277 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 APOL5Q9BWW9 433 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 ZYG11BQ9C0D3 744 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 BRD8Q9H0E9 1235 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 ANLNQ9NQW6 1124 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
RTF1-202ENST00000462276 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 MYH10P35580 1976 aa11.02□□□□□ -0.65
RTF1-202ENST00000462276 SPTBN5Q9NRC6 3674 aaKnown RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CCDC188H7C350 402 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 GFRA2O00451 464 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 APOL1O14791 398 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 NCAM2O15394 837 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CREB3O43889 395 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 SRGAP2O75044 1071 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CLDN11O75508 207 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ECI2O75521 394 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CYBBP04839 570 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 MX2P20592 715 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 TACR2P21452 398 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 KCNA5P22460 613 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 MAPKAPK2P49137 400 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ZXDBP98169 803 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 KLF1Q13351 362 aaPredicted RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 ZNF211Q13398 564 aaPredicted RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 DPYSQ14117 519 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 LEXMQ3ZCV2 418 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 MPPE1Q53F39 396 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 SLC9A4Q6AI14 798 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 TMCO3Q6UWJ1 677 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 Q7L0L9 218 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CHST9Q7L1S5 443 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ZNF572Q7Z3I7 529 aaPredicted RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 RFX6Q8HWS3 928 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 CCDC117Q8IWD4 279 aaPredicted RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 ZNF683Q8IZ20 524 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 HJURPQ8NCD3 748 aaPredicted RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 PCDH19Q8TAB3 1148 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 BPIFB1Q8TDL5 484 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 DEPDC1BQ8WUY9 529 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ING5Q8WYH8 240 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ELSPBP1Q96BH3 223 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 TMA16Q96EY4 203 aaKnown RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 RUNDC3BQ96NL0 473 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 ARHGEF4Q9NR80 690 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 NR2E1Q9Y466 385 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 PLXNA3P51805 1871 aa11.01□□□□□ -0.65
RTF1-202ENST00000462276 MTCL1Q9Y4B5 1905 aaKnown RBP11.01□□□□□ -0.65
RTF1-202ENST00000462276 A0A1B0GVM2 712 aa11□□□□□ -0.65
RTF1-202ENST00000462276 TCAF2A6NFQ2 919 aa11□□□□□ -0.65
RTF1-202ENST00000462276 FAM72CH0Y354 149 aa11□□□□□ -0.65
RTF1-202ENST00000462276 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
RTF1-202ENST00000462276 NRG2O14511 850 aaPredicted RBP11□□□□□ -0.65
RTF1-202ENST00000462276 CST8O60676 142 aa11□□□□□ -0.65
RTF1-202ENST00000462276 PRAMEF12O95522 483 aa11□□□□□ -0.65
RTF1-202ENST00000462276 APOC2P02655 101 aa11□□□□□ -0.65
RTF1-202ENST00000462276 CD48P09326 243 aa11□□□□□ -0.65
RTF1-202ENST00000462276 IRF1P10914 325 aa11□□□□□ -0.65
RTF1-202ENST00000462276 GOT1P17174 413 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms