RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 PIGKQ92643 395 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 NOX5Q96PH1 765 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 ACOX2Q99424 681 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 GABRG3Q99928 467 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 MIS12Q9H081 205 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 PDCL3Q9H2J4 239 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 CACNA2D2Q9NY47 1150 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
RBM39-222ENST00000461849 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 A0A1W2PQF6 199 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
RBM39-222ENST00000461849 TSPAN3O60637 253 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 LATS1O95835 1130 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 LTFP02788 710 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 GZMAP12544 262 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 NCAM1P13591 858 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 GABRG2P18507 467 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TNFAIP3P21580 790 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 DPP6P42658 865 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 ACADSBP45954 432 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 NOMO3P69849 1222 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 RPL6Q02878 288 aaKnown RBP14.36□□□□□ -0.11
RBM39-222ENST00000461849 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 MAP7D1Q3KQU3 841 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 STPG1Q5TH74 334 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 NUGGCQ68CJ6 796 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TCEAL6Q6IPX3 200 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 WDTC1Q8N5D0 677 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TCEAL3Q969E4 200 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 FAM149B1Q96BN6 582 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
RBM39-222ENST00000461849 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 PCDHB18PQ96TA0 734 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 EDEM2Q9BV94 578 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 SLC2A11Q9BYW1 496 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 RXFP3Q9NSD7 469 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 HCN2Q9UL51 889 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 RAD54BQ9Y620 910 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 LAMA1P25391 3075 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 THADAQ6YHU6 1953 aa14.36□□□□□ -0.11
RBM39-222ENST00000461849 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.111e-17■□□□□ 11
RBM39-222ENST00000461849 CAPN9O14815 690 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 MSI1O43347 362 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 SYNCRIPO60506 623 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 UNGP13051 313 aaPredicted RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 NDUFV2P19404 249 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 SLC11A2P49281 568 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 SNX16P57768 344 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 CENPCQ03188 943 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 PDCLQ13371 301 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 EIF4HQ15056 248 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 GEN1Q17RS7 908 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 PPM1JQ5JR12 505 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 ADGRF1Q5T601 910 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 LYSMD4Q5XG99 296 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 PASD1Q8IV76 773 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 FAM217AQ8IXS0 508 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 CCDC170Q8IYT3 715 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 FRMD1Q8N878 549 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 MSANTD4Q8NCY6 345 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 C1orf131Q8NDD1 294 aaKnown RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 CCDC112Q8NEF3 446 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 CLEC4CQ8WTT0 213 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 SLC4A5Q9BY07 1137 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 NHEJ1Q9H9Q4 299 aaPredicted RBP14.35□□□□□ -0.11
RBM39-222ENST00000461849 STON1Q9Y6Q2 735 aa14.35□□□□□ -0.11
RBM39-222ENST00000461849 WASH3PC4AMC7 463 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 TIMM44O43615 452 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 NDUFS2O75306 463 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 TBX4P57082 545 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 SLC18A3Q16572 532 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 NAA35Q5VZE5 725 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 KIAA1211LQ6NV74 962 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 KIAA1324Q6UXG2 1013 aaKnown RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 PHF13Q86YI8 300 aaPredicted RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 TMEM139Q8IV31 216 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 ABCA7Q8IZY2 2146 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 PIWIL1Q96J94 861 aaKnown RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 CCDC42Q96M95 316 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 CHP1Q99653 195 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 BAG1Q99933 345 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms