RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GAL3ST3Q96A11 431 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 TRMT2BQ96GJ1 504 aaKnown RBP5.38□□□□□ -1.55
BRCA1-206ENST00000461574 CCDC120Q96HB5 630 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 ZNF560Q96MR9 790 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 SLC22A12Q96S37 553 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 LINC00597Q9H2U6 94 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 ZHX3Q9H4I2 956 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 FAM124BQ9H5Z6 455 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-206ENST00000461574 CAPN10Q9HC96 672 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 ZDHHC4Q9NPG8 344 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 ARHGEF4Q9NR80 690 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 DPP3Q9NY33 737 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 LARSQ9P2J5 1176 aaKnown RBP5.38□□□□□ -1.55
BRCA1-206ENST00000461574 SUSD2Q9UGT4 822 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
BRCA1-206ENST00000461574 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TBC1D3BA6NDS4 549 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ANTXRLA6NF34 631 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 PP2D1A8MPX8 630 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 MEI4A8MW99 385 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 KPNA7A9QM74 516 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 LEFTY2O00292 366 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ETV2O00321 342 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 SCAMP3O14828 347 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 EPB41L2O43491 1005 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 JAK2O60674 1132 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 HUS1O60921 280 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ZNF217O75362 1048 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 NOL4O94818 638 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 PRB1P04280 392 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 CYP17A1P05093 508 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 KRT18P05783 430 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 FDPSP14324 419 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 HNRNPLP14866 589 aaKnown RBP eCLIP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ACAT1P24752 427 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 CYP2F1P24903 491 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ANXA13P27216 316 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 EIF2DP41214 584 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 PNPLA4P41247 253 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 GRIA2P42262 883 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ACOT2P49753 483 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ATP2C1P98194 919 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 CCDC157Q569K6 752 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 WDR45BQ5MNZ6 344 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 WIPI1Q5MNZ9 446 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 PRAMEF13Q5VWM6 474 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 SDE2Q6IQ49 451 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TOGARAM2Q6ZUX3 1019 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 LRRTM3Q86VH5 581 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 HID1Q8IV36 788 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 SFTPA1Q8IWL2 248 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 GALNT15Q8N3T1 639 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ZNF513Q8N8E2 541 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TRIML1Q8N9V2 468 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ERLEC1Q96DZ1 483 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 C8orf76Q96K31 380 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 KIF2CQ99661 725 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 NTPCRQ9BSD7 190 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ZDHHC5Q9C0B5 715 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 HAPLN2Q9GZV7 340 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ASB7Q9H672 318 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TMLHEQ9NVH6 421 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 SMPD4Q9NXE4 827 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 DDX43Q9NXZ2 648 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 EHD2Q9NZN4 543 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TRPM5Q9NZQ8 1165 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 CALCOCO1Q9P1Z2 691 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 GTF3C4Q9UKN8 822 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 ARHGAP26Q9UNA1 814 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 DERAQ9Y315 318 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 R3HCC1Q9Y3T6 440 aaKnown RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 NAV2Q8IVL1 2488 aa5.37□□□□□ -1.55
BRCA1-206ENST00000461574 MUC22E2RYF6 1773 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-206ENST00000461574 TP53BP1Q12888 1972 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-206ENST00000461574 MYO18AQ92614 2054 aaKnown RBP5.36□□□□□ -1.55
BRCA1-206ENST00000461574 ZNF462Q96JM2 2506 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 ANO9A1A5B4 782 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 WASH4PA8MWX3 477 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 PIRO00625 290 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 CAPN9O14815 690 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 TBCAO75347 108 aaKnown RBP5.36□□□□□ -1.55
BRCA1-206ENST00000461574 CER1O95813 267 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 CST3P01034 146 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-206ENST00000461574 ESR1P03372 595 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 CAPNS1P04632 268 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 INHBBP09529 407 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 RAC2P15153 192 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 TCF3P15923 654 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 GABRG2P18507 467 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 SCP2P22307 547 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 PCSK1P29120 753 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 CDC25AP30304 524 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 BUD31P41223 144 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-206ENST00000461574 WASP42768 502 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 TNFRSF4P43489 277 aa5.36□□□□□ -1.55
BRCA1-206ENST00000461574 SLC6A11P48066 632 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms