RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 POLR2EP19388 210 aaKnown RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 ERCC5P28715 1186 aaPredicted RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 COPAP53621 1224 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 YWHAZP63104 245 aaKnown RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 PTK2Q05397 1052 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 GFPT1Q06210 699 aaPredicted RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 WDR45BQ5MNZ6 344 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 SMYD5Q6GMV2 418 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 TMEM110Q86TL2 294 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 CHSY1Q86X52 802 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 OR2T3Q8NH03 318 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 TOE1Q96GM8 510 aaKnown RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 SLC39A13Q96H72 371 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 LHX5Q9H2C1 402 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 PCDHGC3Q9UN70 934 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 SLC6A14Q9UN76 642 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 TMEM131Q92545 1883 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 HSF2BPO75031 334 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 TRUB2O95900 331 aaKnown RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 GNSP15586 552 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 OXTRP30559 389 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 CD70P32970 193 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 TPMTP51580 245 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 SNX16P57768 344 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 CAMK2GQ13555 558 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 RAPGEF1Q13905 1077 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 VWA3BQ502W6 1294 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 HSP90AA4PQ58FG1 418 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 MS4A13Q5J8X5 152 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 N4BP2L1Q5TBK1 243 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 SH3PXD2AQ5TCZ1 1133 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 SYPL2Q5VXT5 272 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 KIAA0907Q7Z7F0 614 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 ADIPOR2Q86V24 386 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 CARNMT1Q8N4J0 409 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 HDDC3Q8N4P3 179 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 ZNF366Q8N895 744 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 C1orf131Q8NDD1 294 aaKnown RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 ZNF419Q96HQ0 510 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 PPP1R13BQ96KQ4 1090 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 BTN2A3PQ96KV6 586 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 CPXM1Q96SM3 734 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 TUBGCP2Q9BSJ2 902 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 GTPBP2Q9BX10 602 aaKnown RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 GPR174Q9BXC1 333 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 TMEM245Q9H330 911 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 NDST4Q9H3R1 872 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 SYNCQ9H7C4 482 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 CAPN10Q9HC96 672 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 SIX2Q9NPC8 291 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 ASNSD1Q9NWL6 643 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 WSB2Q9NYS7 404 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 DNAJC12Q9UKB3 198 aa14.46□□□□□ -0.09
USP4-206ENST00000461553 AJAP1Q9UKB5 411 aaPredicted RBP14.46□□□□□ -0.09
USP4-206ENST00000461553 KCNJ18B7U540 433 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 F5H5T6 163 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 LUC7L3O95232 432 aaKnown RBP14.45□□□□□ -0.1
USP4-206ENST00000461553 MOCS3O95396 460 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 IGLV3-19P01714 112 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 IGLV3-25P01717 112 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ASLP04424 464 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 GLI1P08151 1106 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 SYPP08247 313 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 KRT9P35527 623 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ST8SIA6P61647 398 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 RPS24P62847 133 aaKnown RBP14.45□□□□□ -0.1
USP4-206ENST00000461553 CDK17Q00537 523 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ZNF252P-AS1Q0IIN9 211 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 KCNJ12Q14500 433 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 PTPRNQ16849 979 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 PLEKHG6Q3KR16 790 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 TTC31Q49AM3 519 aaPredicted RBP14.45□□□□□ -0.1
USP4-206ENST00000461553 DCAF6Q58WW2 860 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ZC3H12AQ5D1E8 599 aaKnown RBP14.45□□□□□ -0.1
USP4-206ENST00000461553 EFHC1Q5JVL4 640 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 RAP1GAP2Q684P5 730 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 LGI2Q8N0V4 545 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ATP6V0D2Q8N8Y2 350 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 FIBINQ8TAL6 211 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 CNTNAP3BQ96NU0 1288 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 CNTNAP3Q9BZ76 1288 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 FSCN3Q9NQT6 498 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ITM2CQ9NQX7 267 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 SLC12A6Q9UHW9 1150 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 ANGPTL2Q9UKU9 493 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 DOCK4Q8N1I0 1966 aa14.45□□□□□ -0.1
USP4-206ENST00000461553 PLXNA2O75051 1894 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 SYNJ2BP-COX16A0A087WUM0 186 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 H0Y626 953 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 OPHN1O60890 802 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 DAB1O75553 588 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 DNTTP04053 509 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 PNMA6AP0CW24 399 aaPredicted RBP14.44□□□□□ -0.1
USP4-206ENST00000461553 SLC2A3P11169 496 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 CSRP1P21291 193 aaKnown RBP14.44□□□□□ -0.1
USP4-206ENST00000461553 ABCB4P21439 1286 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 TACR2P21452 398 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 PMLP29590 882 aa14.44□□□□□ -0.1
USP4-206ENST00000461553 CSKP41240 450 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms