RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NME3Q13232 169 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 SLC18A3Q16572 532 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 ANO4Q32M45 955 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
APTX-209ENST00000460940 TMEM196Q5HYL7 178 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 DGKKQ5KSL6 1271 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 ACBD5Q5T8D3 534 aaPredicted RBP11.49□□□□□ -0.57
APTX-209ENST00000460940 PLEKHA7Q6IQ23 1121 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 HDXQ7Z353 690 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 BNIPLQ7Z465 357 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 TMEM25Q86YD3 366 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 RXFP2Q8WXD0 754 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 RNF34Q969K3 372 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 CLDN23Q96B33 292 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 ZNF653Q96CK0 615 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 XPO6Q96QU8 1125 aaKnown RBP11.49□□□□□ -0.57
APTX-209ENST00000460940 TBCBQ99426 244 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 LRFN3Q9BTN0 628 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 SUFUQ9UMX1 484 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 NENFQ9UMX5 172 aa11.49□□□□□ -0.57
APTX-209ENST00000460940 A0A087X0T9 212 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 KCNU1A8MYU2 1149 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 NEDD8-MDP1E9PL57 170 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 GFRA2O00451 464 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 ENDOD1O94919 500 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 FAM228BP0C875 321 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 GPD1P21695 349 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 OPRD1P41143 372 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 RPS9P46781 194 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 DEUP1Q05D60 604 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 MAMLD1Q13495 774 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 PON2Q15165 354 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 MPPE1Q53F39 396 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 MPP7Q5T2T1 576 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 TRNP1Q6NT89 227 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 ALKBH5Q6P6C2 394 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 DCUN1D2Q6PH85 259 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 TPGS1Q6ZTW0 290 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 STRADAQ7RTN6 431 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 EMC1Q8N766 993 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 TC2NQ8N9U0 490 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 FAM71BQ8TC56 605 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 CFAP57Q96MR6 1250 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 MCEEQ96PE7 176 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 PARD6BQ9BYG5 372 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 MRPL47Q9HD33 250 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 CNOT8Q9UFF9 292 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 NDRG2Q9UN36 371 aaKnown RBP11.48□□□□□ -0.57
APTX-209ENST00000460940 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
APTX-209ENST00000460940 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 TYW5A2RUC4 315 aaKnown RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 TTC36A6NLP5 189 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 AKR1B10O60218 316 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 MOCS2O96007 188 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 TYRP14679 529 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 CD72P21854 359 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 RFC1P35251 1148 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 ZNF143P52747 638 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 VCPP55072 806 aaKnown RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 CCINQ13939 588 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 ASTE1Q2TB18 679 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 FBXO43Q4G163 708 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 FYB2Q5VWT5 728 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 PHLDB2Q86SQ0 1253 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 ZNF557Q8N988 423 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 HJURPQ8NCD3 748 aaPredicted RBP11.47□□□□□ -0.57
APTX-209ENST00000460940 JOSD2Q8TAC2 188 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 PNKPQ96T60 521 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 PRDM16Q9HAZ2 1276 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 COX16Q9P0S2 106 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 VPS18Q9P253 973 aa11.47□□□□□ -0.57
APTX-209ENST00000460940 TULP3O75386 442 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 GJB6O95452 261 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 CHRNB1P11230 501 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 TFE3P19532 575 aaPredicted RBP11.46□□□□□ -0.57
APTX-209ENST00000460940 GRIA2P42262 883 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 GALK1P51570 392 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 CCDC14Q49A88 953 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 CCDC122Q5T0U0 273 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 TTC39BQ5VTQ0 682 aaPredicted RBP11.46□□□□□ -0.57
APTX-209ENST00000460940 RNF43Q68DV7 783 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 NADSYN1Q6IA69 706 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 FSTL4Q6MZW2 842 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 LRRC31Q6UY01 552 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 CHSY1Q86X52 802 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 TMEM105Q8N8V8 129 aa11.46□□□□□ -0.57
APTX-209ENST00000460940 FNIP1Q8TF40 1166 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms