RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 NRDCO43847 1150 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 RNF8O76064 485 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 MTA2O94776 668 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 CYBBP04839 570 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 CYP17A1P05093 508 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 ADH5P11766 374 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 PSMA2P25787 234 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 CTHP32929 405 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 GJA4P35212 333 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 EIF2DP41214 584 aaKnown RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 AIF1P55008 147 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 HDAC4P56524 1084 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 KRT83P78385 493 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 OGDHQ02218 1023 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 C15orf59Q2T9L4 293 aaPredicted RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 PREPLQ4J6C6 727 aaPredicted RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 MPPE1Q53F39 396 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 LY6G5CQ5SRR4 150 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 RAD9BQ6WBX8 426 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 BMP8AQ7Z5Y6 402 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 TMEM25Q86YD3 366 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 LRRC8AQ8IWT6 810 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 SUGP1Q8IWZ8 645 aaKnown RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 NIPA2Q8N8Q9 360 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 FAM172AQ8WUF8 416 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 RFFLQ8WZ73 363 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 NTAN1Q96AB6 310 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 ARHGEF26Q96DR7 871 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 TMA16Q96EY4 203 aaKnown RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 PDLIM2Q96JY6 352 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 NUP85Q9BW27 656 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 ARHGEF3Q9NR81 526 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 GTSE1Q9NYZ3 720 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 MRPS17Q9Y2R5 130 aaKnown RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 KIF26AQ9ULI4 1882 aaPredicted RBP10.29□□□□□ -0.76
VPS45-204ENST00000460366 VCANP13611 3396 aa10.29□□□□□ -0.76
VPS45-204ENST00000460366 F5P12259 2224 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 SYNJ2BP-COX16A0A087WUM0 186 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 A0A0A6YYK5 440 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 BTNL10A8MVZ5 291 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 SPECC1L-ADORA2AF8WAN1 911 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 TRDMT1O14717 391 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 SCAMP3O14828 347 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 ARHGAP6O43182 974 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 CCP110O43303 1012 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PENKP01210 267 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 ADRA1BP35368 520 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PCK1P35558 622 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 ARHGAP25P42331 645 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 HADHBP55084 474 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 NRG1Q02297 640 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 SCAPQ12770 1279 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 GAB4Q2WGN9 574 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 C5orf22Q49AR2 442 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 FAM133BQ5BKY9 247 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 MS4A13Q5J8X5 152 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PIK3R6Q5UE93 754 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 RNF43Q68DV7 783 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 NADSYN1Q6IA69 706 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 ZNF852Q6ZMS4 543 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PSTKQ8IV42 348 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 SIX5Q8N196 739 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 ZNF557Q8N988 423 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 SLC35G2Q8TBE7 412 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 ZNF564Q8TBZ8 553 aaPredicted RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 PRMT1Q99873 361 aaKnown RBP10.28□□□□□ -0.76
VPS45-204ENST00000460366 SLC2A11Q9BYW1 496 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 OSBPL6Q9BZF3 934 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 TKTL2Q9H0I9 626 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 OSBPL2Q9H1P3 480 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 RETREG1Q9H6L5 497 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 HEBP1Q9NRV9 189 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 COX16Q9P0S2 106 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 CTTNBP2NLQ9P2B4 639 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 ANAPC7Q9UJX3 599 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 PIAS3Q9Y6X2 628 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 C5orf42Q9H799 3197 aa10.28□□□□□ -0.76
VPS45-204ENST00000460366 A0A0A0MRY4 1105 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 GOLGA6L7A0A1B0GV03 622 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 TMEM221A6NGB7 291 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 SHISA7A6NL88 538 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 M0R296 226 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 CACNG3O60359 315 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 PAGE1O75459 146 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 MOCS2O96007 188 aaPredicted RBP10.27□□□□□ -0.77
VPS45-204ENST00000460366 TYRP14679 529 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 TACR2P21452 398 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 MAN1A1P33908 653 aa10.27□□□□□ -0.77
VPS45-204ENST00000460366 ATXN1P54253 815 aaKnown RBP10.27□□□□□ -0.77
VPS45-204ENST00000460366 CDO1Q16878 200 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms